RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 H0Y858 1186 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 CYP3A4P08684 503 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 CA8P35219 290 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 PBX3P40426 434 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 MTHFRP42898 656 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 CLCN3P51790 818 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 ECHDC2Q86YB7 292 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 MRPL43Q8N983 215 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 RNF169Q8NCN4 708 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 SAMM50Q9Y512 469 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
CTDNEP1-212ENST00000576613 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 GOLGA8AA7E2F4 631 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 GOLGA8BA8MQT2 603 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 PROB1E7EW31 1015 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 EOMESO95936 686 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 PDGFBP01127 241 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 FUT2Q10981 343 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 SLC39A11Q8N1S5 342 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 POMKQ9H5K3 350 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 DZANK1Q9NVP4 752 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 GABBR1Q9UBS5 961 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 PLXNA3P51805 1871 aa13.18□□□□□ -0.3
CTDNEP1-212ENST00000576613 A0A0U1RQF3 1178 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 BRD1O95696 1058 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 RCAN1P53805 252 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 FOXK2Q01167 660 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 ADAMTS10Q9H324 1103 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 MFSD1Q9H3U5 465 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 BRPF3Q9ULD4 1205 aa13.17□□□□□ -0.3
CTDNEP1-212ENST00000576613 WDR81Q562E7 1941 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 OATP04181 439 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.34e-6■□□□□ 8.6
CTDNEP1-212ENST00000576613 GPC3P51654 580 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 BCAR1P56945 870 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 GIT2Q14161 759 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 PRR16Q569H4 304 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 ATAT1Q5SQI0 421 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 HELQQ8TDG4 1101 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 USTQ9Y2C2 406 aa13.16□□□□□ -0.3
CTDNEP1-212ENST00000576613 CCDC196A0A1B0GTZ2 297 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 CXCL14O95715 111 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 GNA11P29992 359 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 NBL1P41271 181 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 CDC42EP1Q00587 391 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 PRKCEQ02156 737 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
CTDNEP1-212ENST00000576613 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms