RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 CACNA1BQ00975 2339 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 SWSAP1Q6NVH7 229 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 ABHD15Q6UXT9 468 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 CKAP2LQ8IYA6 745 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZNF654Q8IZM8 581 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 DCLK2Q8N568 766 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 IGDCC4Q8TDY8 1250 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 SLC22A17Q8WUG5 538 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 TAF6LQ9Y6J9 622 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 IGKV6D-21A0A0A0MT36 114 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZBTB42B2RXF5 422 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 E7EWF7 191 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 C22orf31O95567 290 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 CCNE2O96020 404 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 SPECC1Q5M775 1068 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 GPR149Q86SP6 731 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 CCDC60Q8IWA6 550 aaPredicted RBP18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 CCDC82Q8N4S0 544 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 PGBD1Q96JS3 809 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 MAP3K14Q99558 947 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZBP1Q9H171 429 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 OSBPL3Q9H4L5 887 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZNF302Q9NR11 478 aa18.52■□□□□ 0.56
CTDNEP1-211ENST00000575783 COL1A2P08123 1366 aa18.52■□□□□ 0.55
CTDNEP1-211ENST00000575783 DDAH1O94760 285 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 GNAQP50148 359 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 ANTXR2P58335 489 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 NLRP11P59045 1033 aaKnown RBP18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 CEP55Q53EZ4 464 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 CHD1LQ86WJ1 897 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 TMEM173Q86WV6 379 aaPredicted RBP18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 RUBCNQ92622 972 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 ZNF668Q96K58 619 aaPredicted RBP18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 AKT3Q9Y243 479 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 LOXHD1Q8IVV2 1947 aa18.51■□□□□ 0.55
CTDNEP1-211ENST00000575783 KRBA1A5PL33 1030 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 ZC3H11AO75152 810 aaKnown RBP eCLIP18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 RXRAP19793 462 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 ATP4AP20648 1035 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 CLCN3P51790 818 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 GIT2Q14161 759 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 NFXL1Q6ZNB6 911 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 RSAD2Q8WXG1 361 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 MRPL9Q9BYD2 267 aaKnown RBP18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 SFXN1Q9H9B4 322 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 LY9Q9HBG7 655 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 DLL3Q9NYJ7 618 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 IGSF9Q9P2J2 1179 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 WNT16Q9UBV4 365 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 CA14Q9ULX7 337 aa18.5■□□□□ 0.55
CTDNEP1-211ENST00000575783 A0A0U1RQF3 1178 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 CTSAP10619 480 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 EIF4BP23588 611 aaKnown RBP18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 ZNF76P36508 570 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 PTH1RQ03431 593 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 RSPO4Q2I0M5 234 aaPredicted RBP18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 LETM2Q2VYF4 491 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 MIS18BP1Q6P0N0 1132 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 ZC3H14Q6PJT7 736 aaKnown RBP18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 PPFIBP1Q86W92 1011 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 ADAMTS10Q9H324 1103 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 IRAK3Q9Y616 596 aa18.49■□□□□ 0.55
CTDNEP1-211ENST00000575783 MEIS1O00470 390 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 DCNP07585 359 aaKnown RBP18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 FGFR4P22455 802 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 KLRC2P26717 231 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 POLGP54098 1239 aaPredicted RBP18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 LONRF3Q496Y0 759 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 EFCAB12Q6NXP0 572 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 DDX53Q86TM3 631 aaKnown RBP18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 ZNF598Q86UK7 904 aaKnown RBP18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 RAB11FIP4Q86YS3 637 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 BBXQ8WY36 941 aaPredicted RBP18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 MAP7D2Q96T17 732 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 TBC1D17Q9HA65 648 aa18.48■□□□□ 0.55
CTDNEP1-211ENST00000575783 SP9P0CG40 484 aa18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 GBP2P32456 591 aaPredicted RBP18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 TBC1D8BQ0IIM8 1120 aa18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 DIEXFQ68CQ4 756 aaKnown RBP18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 LRRC71Q8N4P6 559 aa18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 BCL7CQ8WUZ0 217 aaPredicted RBP18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 IGSF21Q96ID5 467 aa18.47■□□□□ 0.55
CTDNEP1-211ENST00000575783 CCDC69A6NI79 296 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 N4BP1O75113 896 aaKnown RBP18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 SSBP05455 408 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 TMOD1P28289 359 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 NONOQ15233 471 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 SLC44A3Q8N4M1 653 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 EMILIN2Q9BXX0 1053 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 GBP3Q9H0R5 595 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 SIT1Q9Y3P8 196 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 CEP250Q9BV73 2442 aa18.46■□□□□ 0.55
CTDNEP1-211ENST00000575783 KMT2BQ9UMN6 2715 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms