RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RARRES1P49788 294 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 TAP1Q03518 808 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 POU5F1BQ06416 359 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 NFX1Q12986 1120 aaKnown RBP15.14■□□□□ 0.01
CIITA-210ENST00000575513 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
CIITA-210ENST00000575513 EMC2Q15006 297 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 FAM228AQ86W67 206 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
CIITA-210ENST00000575513 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 PSPC1Q8WXF1 523 aaKnown RBP15.14■□□□□ 0.01
CIITA-210ENST00000575513 FAM161BQ96MY7 647 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 RGS18Q9NS28 235 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 CHD9Q3L8U1 2897 aa15.14■□□□□ 0.01
CIITA-210ENST00000575513 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
CIITA-210ENST00000575513 STAG3L1P0CL83 205 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 FAM189BP81408 668 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 PCBP1Q15365 356 aaKnown RBP eCLIP15.13■□□□□ 0.01
CIITA-210ENST00000575513 IL17AQ16552 155 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 KRT79Q5XKE5 535 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 SLC24A5Q71RS6 500 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 TMCO2Q7Z6W1 182 aaPredicted RBP15.13■□□□□ 0.01
CIITA-210ENST00000575513 RHPN2Q8IUC4 686 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 PIGOQ8TEQ8 1089 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
CIITA-210ENST00000575513 LINC01599Q8WXQ3 324 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 CCDC43Q96MW1 224 aaKnown RBP15.13■□□□□ 0.01
CIITA-210ENST00000575513 SCLT1Q96NL6 688 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 MTRQ99707 1265 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
CIITA-210ENST00000575513 ATP6V0A4Q9HBG4 840 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 CHST12Q9NRB3 414 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 COL4A3BPQ9Y5P4 624 aa15.13■□□□□ 0.01
CIITA-210ENST00000575513 EVPLQ92817 2033 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 DENND3A2RUS2 1198 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 SLC26A4O43511 780 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 STX6O43752 255 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 ZSCAN20P17040 1043 aaPredicted RBP15.12■□□□□ 0.01
CIITA-210ENST00000575513 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
CIITA-210ENST00000575513 SARSP49591 514 aaKnown RBP15.12■□□□□ 0.01
CIITA-210ENST00000575513 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 DSC3Q14574 896 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 SRGAP1Q7Z6B7 1085 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 FERMT3Q86UX7 667 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 NPAS4Q8IUM7 802 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 AK8Q96MA6 479 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 PPP1R16BQ96T49 567 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 YME1L1Q96TA2 773 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 ADAM2Q99965 735 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 ELAC1Q9H777 363 aaKnown RBP15.12■□□□□ 0.01
CIITA-210ENST00000575513 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 XPNPEP1Q9NQW7 623 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 MTMR6Q9Y217 621 aa15.12■□□□□ 0.01
CIITA-210ENST00000575513 MICAL3Q7RTP6 2002 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 A0A087WZ62 844 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 LCHNA4D1U4 455 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 LINC01553A4QN01 128 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 C9IYK1 514 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 DGKIO75912 1065 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 UPP2O95045 317 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 POU3F3P20264 500 aaPredicted RBP15.11■□□□□ 0.01
CIITA-210ENST00000575513 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
CIITA-210ENST00000575513 ARL2P36404 184 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 ERVK-21P61565 698 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 FAM117BQ6P1L5 589 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 TMEM143Q96AN5 459 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 ZNF689Q96CS4 500 aaPredicted RBP15.11■□□□□ 0.01
CIITA-210ENST00000575513 SAMD11Q96NU1 681 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 TGS1Q96RS0 853 aaKnown RBP15.11■□□□□ 0.01
CIITA-210ENST00000575513 FDXACB1Q9BRP7 624 aaPredicted RBP15.11■□□□□ 0.01
CIITA-210ENST00000575513 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 NFKBIZQ9BYH8 718 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 RC3H2Q9HBD1 1191 aaKnown RBP15.11■□□□□ 0.01
CIITA-210ENST00000575513 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
CIITA-210ENST00000575513 MORC2Q9Y6X9 1032 aaPredicted RBP15.11■□□□□ 0.01
CIITA-210ENST00000575513 SIP14410 1827 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 MGEA5O60502 916 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
CIITA-210ENST00000575513 RESTQ13127 1097 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 TFDP1Q14186 410 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 BECN1Q14457 450 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 HYIQ5T013 277 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
CIITA-210ENST00000575513 KSR1Q8IVT5 923 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 SNX29Q8TEQ0 813 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
CIITA-210ENST00000575513 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 PCDHB7Q9Y5E2 793 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 TTC3P53804 2025 aa15.1■□□□□ 0.01
CIITA-210ENST00000575513 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 SRGAP2CP0DJJ0 459 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 CYP11B2P19099 503 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 PHKA2P46019 1235 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 PTENP60484 403 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 SF3A1Q15459 793 aaKnown RBP15.09■□□□□ 0.01
CIITA-210ENST00000575513 ECM1Q16610 540 aa15.09■□□□□ 0.01
CIITA-210ENST00000575513 PADI6Q6TGC4 694 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms