RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ENTPD7Q9NQZ7 604 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 SNX14Q9Y5W7 946 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 USP34Q70CQ2 3546 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 FSCN2O14926 492 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 MSH4O15457 936 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 CHMP2AO43633 222 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 ZNF862O60290 1169 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 IFNAR1P17181 557 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 ATF7P17544 494 aaPredicted RBP11.79□□□□□ -0.52
TVP23B-208ENST00000575261 GPC3P51654 580 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 JAK3P52333 1124 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 ERVFC1P60507 584 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 PLCB3Q01970 1234 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 TBC1D8BQ0IIM8 1120 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 CBX2Q14781 532 aaPredicted RBP11.79□□□□□ -0.52
TVP23B-208ENST00000575261 NTRK3Q16288 839 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 LRCH2Q5VUJ6 765 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 PLPP4Q5VZY2 271 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 VN1R2Q8NFZ6 395 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 MRPS27Q92552 414 aaKnown RBP11.79□□□□□ -0.52
TVP23B-208ENST00000575261 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 FBXL18Q96ME1 805 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 ZNF558Q96NG5 402 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 RIT2Q99578 217 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 TCF25Q9BQ70 676 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 SLC26A6Q9BXS9 759 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 NRBP2Q9NSY0 501 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
TVP23B-208ENST00000575261 PUF60Q9UHX1 559 aaKnown RBP11.79□□□□□ -0.52
TVP23B-208ENST00000575261 PSMA5P28066 241 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 USP11P51784 963 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 RBM10P98175 930 aaKnown RBP11.78□□□□□ -0.52
TVP23B-208ENST00000575261 NHLH1Q02575 133 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 UGCGQ16739 394 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 KCNT2Q6UVM3 1135 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 ALYREFQ86V81 257 aaKnown RBP11.78□□□□□ -0.52
TVP23B-208ENST00000575261 ECHDC2Q86YB7 292 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 RDM1Q8NG50 284 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 SUSD6Q92537 303 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 TEKT3Q9BXF9 490 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 C22orf23Q9BZE7 217 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 NGRNQ9NPE2 291 aaKnown RBP11.78□□□□□ -0.52
TVP23B-208ENST00000575261 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 RNF19AQ9NV58 838 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
TVP23B-208ENST00000575261 A0A0U1RQF3 1178 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 M0R296 226 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 REC8O95072 547 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
TVP23B-208ENST00000575261 PBX3P40426 434 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 NLRP5P59047 1200 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 KRT17Q04695 432 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 KCNC3Q14003 757 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 BMP8AQ7Z5Y6 402 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 RNF169Q8NCN4 708 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 TBCKQ8TEA7 893 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 RSPH1Q8WYR4 309 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
TVP23B-208ENST00000575261 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
TVP23B-208ENST00000575261 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.53
TVP23B-208ENST00000575261 NCOA5Q9HCD5 579 aaKnown RBP11.77□□□□□ -0.53
TVP23B-208ENST00000575261 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
TVP23B-208ENST00000575261 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 HIDE1A8MVS5 230 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 PSMD10O75832 226 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 EOMESO95936 686 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 HOXB8P17481 243 aaPredicted RBP11.76□□□□□ -0.53
TVP23B-208ENST00000575261 PDIA3P30101 505 aaKnown RBP11.76□□□□□ -0.53
TVP23B-208ENST00000575261 TECP42680 631 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 MRE11P49959 708 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 EVCP57679 992 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
TVP23B-208ENST00000575261 ZXDAP98168 799 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 CDC42EP1Q00587 391 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
TVP23B-208ENST00000575261 Q4G0T1 1027 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 CLLU1OSQ5K130 101 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 LLGL2Q6P1M3 1020 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 MIER3Q7Z3K6 550 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 TMC7Q7Z402 723 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 SUGP1Q8IWZ8 645 aaKnown RBP11.76□□□□□ -0.53
TVP23B-208ENST00000575261 PBXIP1Q96AQ6 731 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 GCOM2Q9BZD3 368 aaPredicted RBP11.76□□□□□ -0.53
TVP23B-208ENST00000575261 SPG21Q9NZD8 308 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 MYO15AQ9UKN7 3530 aa11.76□□□□□ -0.53
TVP23B-208ENST00000575261 KMT2EQ8IZD2 1858 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 CYP3A7-CYP3A51PA0A087WV96 503 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms