RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LRRC55Q6ZSA7 311 aa17.16■□□□□ 0.34
CTNS-209ENST00000574776 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
CTNS-209ENST00000574776 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
CTNS-209ENST00000574776 CASD1Q96PB1 797 aa17.16■□□□□ 0.34
CTNS-209ENST00000574776 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
CTNS-209ENST00000574776 TLR9Q9NR96 1032 aa17.16■□□□□ 0.34
CTNS-209ENST00000574776 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
CTNS-209ENST00000574776 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 TDP2O95551 362 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 GLP2RO95838 553 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 FGFR4P22455 802 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 CYP3A7P24462 503 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 GPC3P51654 580 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 RBM10P98175 930 aaKnown RBP17.15■□□□□ 0.34
CTNS-209ENST00000574776 TBC1D8BQ0IIM8 1120 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 COASYQ13057 564 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 STK3Q13188 491 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 RNF169Q8NCN4 708 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 SCLT1Q96NL6 688 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 AIFM3Q96NN9 605 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 RNF19AQ9NV58 838 aa17.15■□□□□ 0.34
CTNS-209ENST00000574776 TMEM150BA6NC51 233 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 M0R2N6 131 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
CTNS-209ENST00000574776 DEXIO95424 95 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 DARSP14868 501 aaKnown RBP17.14■□□□□ 0.33
CTNS-209ENST00000574776 LAG3P18627 525 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 DRP2Q13474 957 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 TARBP2Q15633 366 aaKnown RBP17.14■□□□□ 0.33
CTNS-209ENST00000574776 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 RNF135Q8IUD6 432 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 NLRP7Q8WX94 980 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 SH2D3AQ9BRG2 576 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 NIFKQ9BYG3 293 aaKnown RBP17.14■□□□□ 0.33
CTNS-209ENST00000574776 MUTYHQ9UIF7 546 aa17.14■□□□□ 0.33
CTNS-209ENST00000574776 FSCN2O14926 492 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 HOXA2O43364 376 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 EPB41L2O43491 1005 aaKnown RBP17.13■□□□□ 0.33
CTNS-209ENST00000574776 STBD1O95210 358 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 NPY5RQ15761 445 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 DUSP6Q16828 381 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 MTERF2Q49AM1 385 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 XKR3Q5GH77 459 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 KCNT2Q6UVM3 1135 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 SMRP1Q8NCR6 262 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 RDM1Q8NG50 284 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
CTNS-209ENST00000574776 TM6SF1Q9BZW5 370 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 PDRG1Q9NUG6 133 aa17.13■□□□□ 0.33
CTNS-209ENST00000574776 SEPT9Q9UHD8 586 aaPredicted RBP17.13■□□□□ 0.33
CTNS-209ENST00000574776 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
CTNS-209ENST00000574776 MUC6Q6W4X9 2439 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 PBX3P40426 434 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 PLCB3Q01970 1234 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 PLPP4Q5VZY2 271 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 GALNT17Q6IS24 598 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 PDE12Q6L8Q7 609 aaKnown RBP17.12■□□□□ 0.33
CTNS-209ENST00000574776 CPLX2Q6PUV4 134 aaKnown RBP17.12■□□□□ 0.33
CTNS-209ENST00000574776 B3GNT9Q6UX72 402 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 DAGLBQ8NCG7 672 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 MBOAT7Q96N66 472 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 CEP89Q96ST8 783 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 LZTS1Q9Y250 596 aa17.12■□□□□ 0.33
CTNS-209ENST00000574776 USP15Q9Y4E8 981 aaPredicted RBP17.12■□□□□ 0.33
CTNS-209ENST00000574776 A0A0U1RQF3 1178 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 DTNBO60941 627 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 DNM2P50570 870 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 NONOQ15233 471 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTNS-209ENST00000574776 INF2Q27J81 1249 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 HERC4Q5GLZ8 1057 aaPredicted RBP17.11■□□□□ 0.33
CTNS-209ENST00000574776 CLLU1OSQ5K130 101 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 ETNPPLQ8TBG4 499 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
CTNS-209ENST00000574776 TCF25Q9BQ70 676 aa17.11■□□□□ 0.33
CTNS-209ENST00000574776 GCOM2Q9BZD3 368 aaPredicted RBP17.11■□□□□ 0.33
CTNS-209ENST00000574776 DDX25Q9UHL0 483 aaKnown RBP17.11■□□□□ 0.33
CTNS-209ENST00000574776 TRIOO75962 3097 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 A0A087WZ62 844 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 IGKV6-21A0A0C4DH24 114 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 EOMESO95936 686 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
CTNS-209ENST00000574776 CDC42EP1Q00587 391 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 KRT17Q04695 432 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 MOXD1Q6UVY6 613 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 ZNF598Q86UK7 904 aaKnown RBP17.1■□□□□ 0.33
CTNS-209ENST00000574776 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
CTNS-209ENST00000574776 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms