RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 LARSQ9P2J5 1176 aaKnown RBP26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 SEL1LQ9UBV2 794 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 FRMPD3Q5JV73 1810 aa26.58■■□□□ 1.85
ATPAF1-213ENST00000574428 CAVIN2O95810 425 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 ASGR1P07306 291 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 NMT1P30419 496 aaKnown RBP26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 DRP2Q13474 957 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 CCSAPQ6IQ19 270 aaPredicted RBP26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 RNF180Q86T96 592 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 FAM178BQ8IXR5 827 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 BSNDQ8WZ55 320 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 FIZ1Q96SL8 496 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 SETD4Q9NVD3 440 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 CTNND2Q9UQB3 1225 aa26.57■■□□□ 1.84
ATPAF1-213ENST00000574428 MYBP10242 640 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 PEX3P56589 373 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 LUZP1Q86V48 1076 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 IGKV6-21A0A0C4DH24 114 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 GCNT3O95395 438 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 KLRC1P26715 233 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 MKRN4PQ13434 485 aaPredicted RBP26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 STIM1Q13586 685 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 AOPEPQ8N6M6 819 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 METTL13Q8N6R0 699 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 LMBR1Q8WVP7 490 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 BPIFA3Q9BQP9 254 aa26.56■■□□□ 1.84
ATPAF1-213ENST00000574428 CCL5P13501 91 aa26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 MARCH8Q5T0T0 291 aa26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 FBXO46Q6PJ61 603 aaPredicted RBP26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 DHX40Q8IX18 779 aaKnown RBP26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 EXOC8Q8IYI6 725 aa26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 PCSK9Q8NBP7 692 aaKnown RBP26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 ASAP3Q8TDY4 903 aa26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 JPH2Q9BR39 696 aaPredicted RBP26.55■■□□□ 1.84
ATPAF1-213ENST00000574428 ARL2P36404 184 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 CLCN3P51790 818 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 STX17P56962 302 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 DMP1Q13316 513 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 IQCB1Q15051 598 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 COBLL1Q53SF7 1204 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 EFCAB12Q6NXP0 572 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 MTHFD1LQ6UB35 978 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 MYOCDQ8IZQ8 938 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 SCFD1Q8WVM8 642 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 NELFBQ8WX92 580 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 MED15Q96RN5 788 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 PAK6Q9NQU5 681 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 NRCAMQ92823 1304 aa26.54■■□□□ 1.84
ATPAF1-213ENST00000574428 K7ENM7 598 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 GAS2O43903 313 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 ERCC5P28715 1186 aaPredicted RBP26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 NPTX2P47972 431 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 RTP1P59025 263 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 PAK1Q13153 545 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 ZC2HC1CQ53FD0 456 aaPredicted RBP26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 EPM2AIP1Q7L775 607 aaPredicted RBP26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 GUF1Q8N442 669 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 KIFC3Q9BVG8 833 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 RRN3P2A6NIE6 340 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 CCDC169A6NNP5 214 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 PSMA7O14818 248 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 MAGEB2O15479 319 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 GLRA2P23416 452 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 HIC1Q14526 733 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 ZNF720Q7Z2F6 126 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 C7orf31Q8N865 590 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 RETREG2Q8NC44 543 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 PRPF31Q8WWY3 499 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 IFT74Q96LB3 600 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 RNF208Q9H0X6 261 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 C17orf75Q9HAS0 396 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 HDAC6Q9UBN7 1215 aa26.53■■□□□ 1.84
ATPAF1-213ENST00000574428 SLC16A4O15374 487 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 ACLYP53396 1101 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 NBPF20Q3BBV1 942 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 CT47A1Q5JQC4 288 aaPredicted RBP26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 IER5Q5VY09 327 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 NELFCDQ8IXH7 590 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 TCP11Q8WWU5 503 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 DHTKD1Q96HY7 919 aaPredicted RBP26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 DEFB118Q96PH6 123 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 SCN10AQ9Y5Y9 1956 aa26.52■■□□□ 1.84
ATPAF1-213ENST00000574428 PRPF6O94906 941 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 NFRKBQ6P4R8 1299 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 KSR1Q8IVT5 923 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 PSPC1Q8WXF1 523 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 KMT5AQ9NQR1 393 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 SUCLA2Q9P2R7 463 aaPredicted RBP26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 RWDD2AQ9UIY3 292 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 TRIM49BA6NDI0 452 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 BECN2A8MW95 431 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 GJB1P08034 283 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 PPP1R2P41236 205 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 PMS1P54277 932 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 NCKAP1LP55160 1127 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 MYL5Q02045 173 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 LINC01465Q8N7H1 131 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 SPIRE2Q8WWL2 714 aa26.51■■□□□ 1.83
ATPAF1-213ENST00000574428 ADGRA3Q8IWK6 1321 aa26.5■■□□□ 1.83
ATPAF1-213ENST00000574428 MAPTP10636 758 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms