RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 RAB17Q9H0T7 212 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 BACH1O14867 736 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 FAM13AO94988 1023 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 GAP43P17677 238 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 ZNF76P36508 570 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 QPCTQ16769 361 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 ZC2HC1CQ53FD0 456 aaPredicted RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 OLIG1Q8TAK6 271 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 YY1AP1Q9H869 796 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 NYAP2Q9P242 653 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 DDX3YO15523 660 aaKnown RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 GYS1P13807 737 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 HOXA13P31271 388 aaPredicted RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 FMO5P49326 533 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 DR1Q01658 176 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 IKQ13123 557 aaPredicted RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 DCAF12L1Q5VU92 463 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 TEKT1Q969V4 418 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 DIS3Q9Y2L1 958 aaKnown RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 NCANO14594 1321 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 PTENP60484 403 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 PPATQ06203 517 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 TCP10Q12799 353 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 DRP2Q13474 957 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
NUP88-207ENST00000573584 PLS1Q14651 629 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 ATP8B4Q8TF62 1192 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 PSMD1Q99460 953 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 LRRC4CQ9HCJ2 640 aa16.97■□□□□ 0.31
NUP88-207ENST00000573584 IGSF9BQ9UPX0 1349 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 PAEPP09466 180 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 CIITAP33076 1130 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 COPB2P35606 906 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 SMTNP53814 917 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 PLCB4Q15147 1175 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
NUP88-207ENST00000573584 NAP1L3Q99457 506 aaPredicted RBP16.96■□□□□ 0.31
NUP88-207ENST00000573584 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
NUP88-207ENST00000573584 GOLGA6L10A0A0M3HER8 536 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 F5H6K3 240 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 EIF3DO15371 548 aaKnown RBP eCLIP16.96■□□□□ 0.3
NUP88-207ENST00000573584 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.3
NUP88-207ENST00000573584 EIF3BP55884 814 aaKnown RBP16.96■□□□□ 0.3
NUP88-207ENST00000573584 KLRC3Q07444 240 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 COG2Q14746 738 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 KSR1Q8IVT5 923 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 SP8Q8IXZ3 490 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 ERP44Q9BS26 406 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 CARD9Q9H257 536 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 ZMYM2Q9UBW7 1377 aa16.96■□□□□ 0.3
NUP88-207ENST00000573584 KIF13BQ9NQT8 1826 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 ADRA2BP18089 450 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 TNFAIP3P21580 790 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CACNB3P54284 484 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 ZNF211Q13398 564 aaPredicted RBP16.95■□□□□ 0.3
NUP88-207ENST00000573584 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CBWD6Q4V339 395 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CBWD3Q5JTY5 395 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CBWD5Q5RIA9 395 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 SIAH1Q8IUQ4 282 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 TPH2Q8IWU9 490 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 GLG1Q92896 1179 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 ARHGEF26Q96DR7 871 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 DAAM1Q9Y4D1 1078 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 PPEF1O14829 653 aaPredicted RBP16.95■□□□□ 0.3
NUP88-207ENST00000573584 CCDC172P0C7W6 258 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 DDR1Q08345 913 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CPLX4Q7Z7G2 160 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CACNA2D3Q8IZS8 1091 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 CCDC114Q96M63 670 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 SYT11Q9BT88 431 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 TXLNGYQ9BZA5 131 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 OSBPL7Q9BZF2 842 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 GPR88Q9GZN0 384 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 THAP2Q9H0W7 228 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
NUP88-207ENST00000573584 PHF20L1A8MW92 1017 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 CYP2J2P51589 502 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 ICA1Q05084 483 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 DUPD1Q68J44 220 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 SLC30A10Q6XR72 485 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 CCDC91Q7Z6B0 441 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 MKNK1Q9BUB5 465 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 ACTR5Q9H9F9 607 aaPredicted RBP16.94■□□□□ 0.3
NUP88-207ENST00000573584 PARVGQ9HBI0 331 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 ERVK-5Q9HDB9 667 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 KLC4Q9NSK0 619 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 TAS2R14Q9NYV8 317 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 FRMD4BQ9Y2L6 1034 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 C5orf60A6NFR6 353 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms