RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 GNL2Q13823 731 aaKnown RBP18.06■□□□□ 0.48
NDE1-205ENST00000572756 TPH2Q8IWU9 490 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 GDPD5Q8WTR4 605 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 CEP170P1Q96L14 293 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 SAMD11Q96NU1 681 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 ADAM2Q99965 735 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 JPH2Q9BR39 696 aaPredicted RBP18.06■□□□□ 0.48
NDE1-205ENST00000572756 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 C9IYK1 514 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 OR52Z1P0C646 297 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 RFC5P40937 340 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 DNM2P50570 870 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 CDC42EP1Q00587 391 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 NBR1Q14596 966 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 EPC2Q52LR7 807 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 OTUD6AQ7L8S5 288 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
NDE1-205ENST00000572756 CLP1Q92989 425 aaKnown RBP18.05■□□□□ 0.48
NDE1-205ENST00000572756 C1orf112Q9NSG2 853 aa18.05■□□□□ 0.48
NDE1-205ENST00000572756 SUCLA2Q9P2R7 463 aaPredicted RBP18.05■□□□□ 0.48
NDE1-205ENST00000572756 NOL7Q9UMY1 257 aaKnown RBP18.05■□□□□ 0.48
NDE1-205ENST00000572756 ATG2AQ2TAZ0 1938 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 SPTBN5Q9NRC6 3674 aaKnown RBP18.04■□□□□ 0.48
NDE1-205ENST00000572756 DENND3A2RUS2 1198 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 STAG3L1P0CL83 205 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 SPATA31C1P0DKV0 1188 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 FAM189BP81408 668 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 CUL4AQ13619 759 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 SLC24A5Q71RS6 500 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 ZNF410Q86VK4 478 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 EXOC8Q8IYI6 725 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 FIBCD1Q8N539 461 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 FBXO22Q8NEZ5 403 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 NLRP7Q8WX94 980 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 SLC7A3Q8WY07 619 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 ANKEF1Q9NU02 776 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 LMCD1Q9NZU5 365 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
NDE1-205ENST00000572756 A0A087WZ62 844 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 GTPBP6O43824 516 aaPredicted RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 GAS2O43903 313 aaKnown RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 TECP42680 631 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 CCDC85BQ15834 202 aaPredicted RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 XKR9Q5GH70 373 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 RHPN2Q8IUC4 686 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 KSR1Q8IVT5 923 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 TMEM192Q8IY95 271 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 CMTR2Q8IYT2 770 aaKnown RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 PPM1EQ8WY54 764 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 FDXACB1Q9BRP7 624 aaPredicted RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 XPNPEP1Q9NQW7 623 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 SMC3Q9UQE7 1217 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.03■□□□□ 0.48
NDE1-205ENST00000572756 PCDHB6Q9Y5E3 794 aa18.03■□□□□ 0.48
NDE1-205ENST00000572756 C5orf67F2Z3F1 127 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 CSDE1O75534 798 aaKnown RBP18.02■□□□□ 0.48
NDE1-205ENST00000572756 FGFR4P22455 802 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 RARRES1P49788 294 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 FXR2P51116 673 aaKnown RBP eCLIP18.02■□□□□ 0.48
NDE1-205ENST00000572756 BTG3Q14201 252 aaPredicted RBP18.02■□□□□ 0.48
NDE1-205ENST00000572756 EMC2Q15006 297 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 CATSPER3Q86XQ3 398 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 TMEM143Q96AN5 459 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 POLR3CQ9BUI4 534 aaPredicted RBP18.02■□□□□ 0.48
NDE1-205ENST00000572756 ELAC1Q9H777 363 aaKnown RBP18.02■□□□□ 0.48
NDE1-205ENST00000572756 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 TUFT1Q9NNX1 390 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 PRDM6Q9NQX0 595 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 BRWD1Q9NSI6 2320 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 COL4A3BPQ9Y5P4 624 aa18.02■□□□□ 0.48
NDE1-205ENST00000572756 MYO7AQ13402 2215 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 H3BNC9 293 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 MED24O75448 989 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.478e-7■■□□□ 11.8
NDE1-205ENST00000572756 GATMP50440 423 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
NDE1-205ENST00000572756 PSPC1Q8WXF1 523 aaKnown RBP18.01■□□□□ 0.47
NDE1-205ENST00000572756 NLRP4Q96MN2 994 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 MTRQ99707 1265 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
NDE1-205ENST00000572756 BMP2KQ9NSY1 1161 aaPredicted RBP18.01■□□□□ 0.47
NDE1-205ENST00000572756 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
NDE1-205ENST00000572756 TMEM161AQ9NX61 479 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 LRFN2Q9ULH4 789 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
NDE1-205ENST00000572756 MRPL42Q9Y6G3 142 aaKnown RBP18.01■□□□□ 0.47
NDE1-205ENST00000572756 RB1P06400 928 aa18■□□□□ 0.47
NDE1-205ENST00000572756 RPA1P27694 616 aa18■□□□□ 0.47
NDE1-205ENST00000572756 BMPR1AP36894 532 aa18■□□□□ 0.47
NDE1-205ENST00000572756 LAMTOR4Q0VGL1 99 aa18■□□□□ 0.47
NDE1-205ENST00000572756 PTGDRQ13258 359 aa18■□□□□ 0.47
NDE1-205ENST00000572756 MCTP1Q6DN14 999 aa18■□□□□ 0.47
NDE1-205ENST00000572756 FERMT3Q86UX7 667 aa18■□□□□ 0.47
NDE1-205ENST00000572756 MICALL1Q8N3F8 863 aa18■□□□□ 0.47
NDE1-205ENST00000572756 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
NDE1-205ENST00000572756 TCP11Q8WWU5 503 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms