RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MTMR9Q96QG7 549 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 FDXACB1Q9BRP7 624 aaPredicted RBP19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 FOXP1Q9H334 677 aaPredicted RBP19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 ZSWIM4Q9H7M6 989 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 COL4A4P53420 1690 aaPredicted RBP19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 A0A087WWV3 80 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 POTEMA6NI47 508 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 C9IYK1 514 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 H3BNC9 293 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 SLITRK3O94933 977 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 LINC00271P0C7V0 271 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 FGFR1P11362 822 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 BMPR1AP36894 532 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 DSC3Q14574 896 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 NBR1Q14596 966 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 XKR9Q5GH70 373 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 FAM102BQ5T8I3 360 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 CMTR2Q8IYT2 770 aaKnown RBP19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 SLC7A3Q8WY07 619 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 TMX3Q96JJ7 454 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 TBC1D32Q96NH3 1257 aa19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 GCOM2Q9BZD3 368 aaPredicted RBP19.89■□□□□ 0.77
CTDNEP1-207ENST00000572043 TBKBP1A7MCY6 615 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 ZSCAN20P17040 1043 aaPredicted RBP19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 PTPROQ16827 1216 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 TJAP1Q5JTD0 557 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 TTC38Q5R3I4 469 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 OTUD6AQ7L8S5 288 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 NOSTRINQ8IVI9 506 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 RNF169Q8NCN4 708 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 ATXN2LQ8WWM7 1075 aaKnown RBP19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 ASB2Q96Q27 587 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 JPH2Q9BR39 696 aaPredicted RBP19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 LMCD1Q9NZU5 365 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 CHD9Q3L8U1 2897 aa19.88■□□□□ 0.77
CTDNEP1-207ENST00000572043 TECP42680 631 aa19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 MRPS5P82675 430 aaKnown RBP19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 SPOUT1Q5T280 376 aaKnown RBP19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 ZNF710Q8N1W2 664 aa19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 MRPL38Q96DV4 380 aaKnown RBP19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 ATP6V0A4Q9HBG4 840 aa19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 HCSTQ9UBK5 93 aa19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 RWDD3Q9Y3V2 267 aa19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 EYSQ5T1H1 3165 aa19.87■□□□□ 0.77
CTDNEP1-207ENST00000572043 GRM6O15303 877 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 OR52Z1P0C646 297 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 SRGAP2CP0DJJ0 459 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 RFC5P40937 340 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 EMC2Q15006 297 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 CLP1Q92989 425 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 HSD17B14Q9BPX1 270 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 C11orf84Q9BUA3 381 aaPredicted RBP19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 DHX33Q9H6R0 707 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 ALG13Q9NP73 1137 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 TMEM161AQ9NX61 479 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 NOL7Q9UMY1 257 aaKnown RBP19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 COL4A3BPQ9Y5P4 624 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 COL4A6Q14031 1691 aa19.86■□□□□ 0.77
CTDNEP1-207ENST00000572043 C5orf67F2Z3F1 127 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 RB1P06400 928 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 CDC42EP1Q00587 391 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 ZNF410Q86VK4 478 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 IL27Q8NEV9 243 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 PIGOQ8TEQ8 1089 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 PRPF31Q8WWY3 499 aaKnown RBP19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 PSPC1Q8WXF1 523 aaKnown RBP19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 HLA-CQ95604 372 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 CCDC43Q96MW1 224 aaKnown RBP19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 MTRQ99707 1265 aa19.85■□□□□ 0.77
CTDNEP1-207ENST00000572043 SFPQP23246 707 aaKnown RBP eCLIP19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 GJB2P29033 226 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 KCNQ1P51787 676 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 FAM189BP81408 668 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 LONRF3Q496Y0 759 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 CATSPER4Q7RTX7 472 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 ECHDC2Q86YB7 292 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 NEK9Q8TD19 979 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 RNF216Q9NWF9 866 aaPredicted RBP19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 PIN4Q9Y237 131 aaKnown RBP19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 PPME1Q9Y570 386 aa19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 MYH9P35579 1960 aaKnown RBP19.84■□□□□ 0.77
CTDNEP1-207ENST00000572043 MED24O75448 989 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 LYPLA2O95372 231 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 LAMTOR4Q0VGL1 99 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 TIGD5Q53EQ6 642 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 TCEAL5Q5H9L2 206 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 EP400NLQ6ZTU2 488 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 EXOC8Q8IYI6 725 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 KLHL23Q8NBE8 558 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 SYMPKQ92797 1274 aaKnown RBP19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 INO80BQ9C086 356 aaPredicted RBP19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 ELAC1Q9H777 363 aaKnown RBP19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 IFT122Q9HBG6 1241 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 XPNPEP1Q9NQW7 623 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 COG5Q9UP83 839 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 PLAGL2Q9UPG8 496 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 KIF3AQ9Y496 699 aa19.83■□□□□ 0.77
CTDNEP1-207ENST00000572043 CHD7Q9P2D1 2997 aa19.83■□□□□ 0.76
CTDNEP1-207ENST00000572043 SPATA31C1P0DKV0 1188 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms