RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NPEPPSP55786 919 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 ARHGAP44Q17R89 818 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 ANKRD20A8PQ5CZ79 823 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 PALB2Q86YC2 1186 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 RFFLQ8WZ73 363 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 HAUS2Q9NVX0 235 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 TMOD4Q9NZQ9 345 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 SNX24Q9Y343 169 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 RABGAP1Q9Y3P9 1069 aa18.95■□□□□ 0.62
SCARF1-205ENST00000571272 EML1O00423 815 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 ZBTB39O15060 712 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 SLC16A3O15427 465 aaKnown RBP18.94■□□□□ 0.62
SCARF1-205ENST00000571272 EEF2P13639 858 aaKnown RBP18.94■□□□□ 0.62
SCARF1-205ENST00000571272 ANXA13P27216 316 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 HOXA13P31271 388 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-205ENST00000571272 GKAP1Q5VSY0 366 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-205ENST00000571272 SLFN13Q68D06 897 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 MYCT1Q8N699 235 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 TATDN2Q93075 761 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 ZKSCAN4Q969J2 545 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-205ENST00000571272 GLT8D2Q9H1C3 349 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 BCS1LQ9Y276 419 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 MSH4O15457 936 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 TRIM49P0CI25 452 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 TRIM49CP0CI26 452 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 CTTNQ14247 550 aaKnown RBP18.94■□□□□ 0.62
SCARF1-205ENST00000571272 RAB17Q9H0T7 212 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 THAP2Q9H0W7 228 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 DAAM1Q9Y4D1 1078 aa18.94■□□□□ 0.62
SCARF1-205ENST00000571272 CTNND1O60716 968 aaKnown RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PPFIA2O75334 1257 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CACNB3P54284 484 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PTENP60484 403 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 IKQ13123 557 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 DRP2Q13474 957 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PLS1Q14651 629 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PLCB4Q15147 1175 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 BMT2Q1RMZ1 405 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CBWD6Q4V339 395 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CBWD3Q5JTY5 395 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CBWD5Q5RIA9 395 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 UHMK1Q8TAS1 419 aaKnown RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CRYGNQ8WXF5 182 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 BORCS6Q96GS4 357 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CHUKO15111 745 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 LRRN2O75325 713 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 HLA-DOAP06340 250 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PAEPP09466 180 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 KRT13P13646 458 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 LMNB1P20700 586 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PSMC2P35998 433 aaKnown RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 CYP2J2P51589 502 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 PPATQ06203 517 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 TCP10Q12799 353 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 C3orf20Q8ND61 904 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 ALG3Q92685 438 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 RBM17Q96I25 401 aaKnown RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 SELENOSQ9BQE4 189 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 EIF2AK1Q9BQI3 630 aaKnown RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 ERP44Q9BS26 406 aa18.93■□□□□ 0.62
SCARF1-205ENST00000571272 ACTR5Q9H9F9 607 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-205ENST00000571272 FAM13AO94988 1023 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 TMEM253P0C7T8 217 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 FMO5P49326 533 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 GSCP56915 257 aaPredicted RBP18.92■□□□□ 0.62
SCARF1-205ENST00000571272 RINT1Q6NUQ1 792 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 CDC42EP5Q6NZY7 148 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 RDH13Q8NBN7 331 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 STK33Q9BYT3 514 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 GTPBP10A4D1E9 387 aaKnown RBP18.92■□□□□ 0.62
SCARF1-205ENST00000571272 C5orf60A6NFR6 353 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 SLC26A4O43511 780 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 CHMP2AO43633 222 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 DRD4P21917 467 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 RDXP35241 583 aaKnown RBP18.92■□□□□ 0.62
SCARF1-205ENST00000571272 ZNF76P36508 570 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 SCTRP47872 440 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 AP3B2Q13367 1082 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 UBAP2Q5T6F2 1119 aaKnown RBP18.92■□□□□ 0.62
SCARF1-205ENST00000571272 DUPD1Q68J44 220 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 FUKQ8N0W3 1084 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 FBXO25Q8TCJ0 367 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 TLCD1Q96CP7 247 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
SCARF1-205ENST00000571272 EPB41L4BQ9H329 900 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 CHORDC1Q9UHD1 332 aaPredicted RBP18.92■□□□□ 0.62
SCARF1-205ENST00000571272 COG5Q9UP83 839 aa18.92■□□□□ 0.62
SCARF1-205ENST00000571272 TNFAIP3P21580 790 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 CRY2Q49AN0 593 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 Q4G0T1 1027 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 CYB5D1Q6P9G0 228 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 TPH2Q8IWU9 490 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 TXLNGYQ9BZA5 131 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 ZDHHC18Q9NUE0 388 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 TTC7AQ9ULT0 858 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-205ENST00000571272 ZMYM2Q9UBW7 1377 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 GOLGA6L10A0A0M3HER8 536 aa18.91■□□□□ 0.62
SCARF1-205ENST00000571272 PPP1R12BO60237 982 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-205ENST00000571272 CHN1P15882 459 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms