RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SSBP05455 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMG6-205ENST00000570659 CNPP09543 421 aaKnown RBP8.27□□□□□ -1.09
SMG6-205ENST00000570659 SPATA31D3P0C874 917 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 CLCN3P51790 818 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 CLCN4P51793 760 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 TROAPQ12815 778 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 DRP2Q13474 957 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 LETM2Q2VYF4 491 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
SMG6-205ENST00000570659 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 XRRA1Q6P2D8 792 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 SPATA31D4Q6ZUB0 917 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 TRMT1LQ7Z2T5 733 aaKnown RBP8.27□□□□□ -1.09
SMG6-205ENST00000570659 ZNF280BQ86YH2 543 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 RAB11FIP4Q86YS3 637 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 LINC01465Q8N7H1 131 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 GPRASP2Q96D09 838 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 KLHL5Q96PQ7 755 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 ADAMTS10Q9H324 1103 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 MAP3K20Q9NYL2 800 aaKnown RBP8.27□□□□□ -1.09
SMG6-205ENST00000570659 WNT16Q9UBV4 365 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 IGF2RP11717 2491 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 SETXQ7Z333 2677 aaKnown RBP8.26□□□□□ -1.09
SMG6-205ENST00000570659 IGKV6D-21A0A0A0MT36 114 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 RRN3P2A6NIE6 340 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 DDX39AO00148 427 aaKnown RBP8.26□□□□□ -1.09
SMG6-205ENST00000570659 STK25O00506 426 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 ZNF213O14771 459 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 SRGAP2BP0DMP2 458 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 CTSAP10619 480 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 TDGF1P13385 188 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 SDSP20132 328 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 SLC11A1P49279 550 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 NTHL1P78549 312 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 FZD5Q13467 585 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 HTR4Q13639 388 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 PPM1JQ5JR12 505 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 IFIT1BQ5T764 474 aaKnown RBP8.26□□□□□ -1.09
SMG6-205ENST00000570659 CCDC149Q6ZUS6 474 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 LRRC43Q8N309 656 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 PJA1Q8NG27 643 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 NELL1Q92832 810 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 B3GALT6Q96L58 329 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 ELAC1Q9H777 363 aaKnown RBP8.26□□□□□ -1.09
SMG6-205ENST00000570659 JPH1Q9HDC5 661 aaPredicted RBP8.26□□□□□ -1.09
SMG6-205ENST00000570659 JADE2Q9NQC1 790 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 ARHGEF3Q9NR81 526 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 KCNH7Q9NS40 1196 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 C1orf112Q9NSG2 853 aa8.26□□□□□ -1.09
SMG6-205ENST00000570659 CNOT1A5YKK6 2376 aaKnown RBP8.26□□□□□ -1.09
SMG6-205ENST00000570659 WDFY3Q8IZQ1 3526 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 DHX15O43143 795 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 LILRB5O75023 590 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 ZC3H11AO75152 810 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMG6-205ENST00000570659 STAM2O75886 525 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 DDHD2O94830 711 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 ATG7O95352 703 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 GALTP07902 379 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 PCP11498 1178 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 SRFP11831 508 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 RXRAP19793 462 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 STAT5BP51692 787 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 GPC5P78333 572 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 SNW1Q13573 536 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 MTMR1Q13613 665 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 CWC27Q6UX04 472 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 ABHD15Q6UXT9 468 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 OTOP3Q7RTS5 596 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 CABP7Q86V35 215 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 IQCA1Q86XH1 822 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 LRRC71Q8N4P6 559 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 SRBD1Q8N5C6 995 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 ZBTB44Q8NCP5 570 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 SMARCC2Q8TAQ2 1214 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 FGF14Q92915 247 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 IGSF21Q96ID5 467 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 SEMA4AQ9H3S1 761 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 RNF41Q9H4P4 317 aaPredicted RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 RXFP3Q9NSD7 469 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 TBC1D13Q9NVG8 400 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 SLC9A2Q9UBY0 812 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 PUF60Q9UHX1 559 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 SMG5Q9UPR3 1016 aaKnown RBP8.25□□□□□ -1.09
SMG6-205ENST00000570659 SIT1Q9Y3P8 196 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 IRAK3Q9Y616 596 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 NUMBLQ9Y6R0 609 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 COL4A2P08572 1712 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 PKD1L2Q7Z442 2459 aa8.25□□□□□ -1.09
SMG6-205ENST00000570659 ANKRD11Q6UB99 2663 aaPredicted RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 TMEM150BA6NC51 233 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 ANHXE9PGG2 379 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 M0QZ92 97 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 ZIC2O95409 532 aaPredicted RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 EFEMP2O95967 443 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 GBP2P32456 591 aaPredicted RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 CRYBB1P53674 252 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms