RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 HBP1O60381 514 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 GPR32O75388 356 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 ATG7O95352 703 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 CTSAP10619 480 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 LETM2Q2VYF4 491 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 KIAA0319Q5VV43 1072 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 MAML2Q8IZL2 1156 aaPredicted RBP11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 DSCC1Q9BVC3 393 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 KCNH7Q9NS40 1196 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 SIT1Q9Y3P8 196 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 NFASCO94856 1347 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 IGKV6D-21A0A0A0MT36 114 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 ZBTB42B2RXF5 422 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 VTNP04004 478 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 GLULP15104 373 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 SDHBP21912 280 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 ALDH7A1P49419 539 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 SLC26A2P50443 739 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 GIT2Q14161 759 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 UBE2SQ16763 222 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 PHLDB3Q6NSJ2 640 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 SLC44A3Q8N4M1 653 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 COL1A2P08123 1366 aa11.92□□□□□ -0.5
CTDNEP1-202ENST00000570380 COL4A3Q01955 1670 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 DCDC2BA2VCK2 349 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 KINO60870 393 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 SRFP11831 508 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 POLGP54098 1239 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 ZNF484Q5JVG2 852 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 DDX53Q86TM3 631 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 GPR152Q8TDT2 470 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 BCL7CQ8WUZ0 217 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 PSTPIP2Q9H939 334 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 NCDNQ9UBB6 729 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 PCDHA6Q9UN73 950 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 PCDHA8Q9Y5H6 950 aa11.91□□□□□ -0.5
CTDNEP1-202ENST00000570380 A0A0U1RQF3 1178 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 LRRN2O75325 713 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 C22orf31O95567 290 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 CCNE2O96020 404 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 ADRB1P08588 477 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 ATP4AP20648 1035 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 GBP2P32456 591 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 CLCN4P51793 760 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 WTAPQ15007 396 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 PTPN14Q15678 1187 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 RALGAPA1Q6GYQ0 2036 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 ABHD15Q6UXT9 468 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 GPR161Q8N6U8 529 aaKnown RBP11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 IGSF21Q96ID5 467 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 KLHL5Q96PQ7 755 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 MYADMQ96S97 322 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 MRPL9Q9BYD2 267 aaKnown RBP11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 FOXQ1Q9C009 403 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 ARHGEF3Q9NR81 526 aa11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
CTDNEP1-202ENST00000570380 SPDYE3A6NKU9 549 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 BACH1O14867 736 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZC3H11AO75152 810 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 CNPP09543 421 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 NLRP11P59045 1033 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 ARHGAP8P85298 464 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 METTL13Q8N6R0 699 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 CMASQ8NFW8 434 aaPredicted RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 PJA1Q8NG27 643 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 RTKNQ9BST9 563 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 NRDE2Q9H7Z3 1164 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 AGO4Q9HCK5 861 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 WDR6Q9NNW5 1121 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 EPS15L1Q9UBC2 864 aa11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 CDV3Q9UKY7 258 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-202ENST00000570380 ERICH2A1L162 156 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 DDX39AO00148 427 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 SPTLC1O15269 473 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 LILRB3O75022 631 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 GALTP07902 379 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 TGM1P22735 817 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms