RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 TIMP1P01033 207 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 IGHA2P01877 340 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 FAM157BP0CG42 384 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 GNAT1P11488 350 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 ACTN1P12814 892 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 UBA1P22314 1058 aaKnown RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 PTGS1P23219 599 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 COL8A1P27658 744 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 CDC27P30260 824 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 ATP1A2P50993 1020 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 NEK4P51957 841 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 CCL23P55773 120 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 PCBP4P57723 403 aaKnown RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 ANAPC15P60006 121 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 PURAQ00577 322 aaKnown RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 AP3B2Q13367 1082 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 SNX17Q15036 470 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 PTGISQ16647 500 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 PFKFB3Q16875 520 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 KIAA0753Q2KHM9 967 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 CELF3Q5SZQ8 465 aaKnown RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 C1orf53Q5VUE5 145 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 JAKMIP3Q5VZ66 844 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 NFRKBQ6P4R8 1299 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 CYFIP1Q7L576 1253 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 ANKRD33Q7Z3H0 272 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 VSIG10LQ86VR7 867 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 CKAP2LQ8IYA6 745 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 RPUSD2Q8IZ73 545 aaKnown RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 IL31RAQ8NI17 732 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 PGBD1Q96JS3 809 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 BTBD6Q96KE9 485 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 RNF26Q9BY78 433 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 ANO3Q9BYT9 981 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 TM6SF1Q9BZW5 370 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 SEMA6BQ9H3T3 888 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 SUV39H2Q9H5I1 410 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 RIC8AQ9NPQ8 531 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 HCN4Q9Y3Q4 1203 aa5.48□□□□□ -1.53
CNOT1-219ENST00000569882 MAFBQ9Y5Q3 323 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 TNRC18O15417 2968 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-219ENST00000569882 MYH9P35579 1960 aaKnown RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TRIP12Q14669 1992 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 LTBP2Q14767 1821 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 CCDC194A0A1B0GVG4 234 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 C17orf102A2RUQ5 167 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 KRBA1A5PL33 1030 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TRIM43BA6NCK2 446 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 A6NJR5 290 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 M0QZ92 97 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 STXBP3O00186 592 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 MEIS2O14770 477 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 OPLAHO14841 1288 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 PRPF3O43395 683 aaKnown RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 CYP2C9P11712 490 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 IFNAR1P17181 557 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 MARK3P27448 753 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 PDIA3P30101 505 aaKnown RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 CYP2C18P33260 490 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 BMP8BP34820 402 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 KCNJ6P48051 423 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 ARHGAP4P98171 946 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 SETQ01105 290 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 ARHGAP1Q07960 439 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 FAAP100Q0VG06 881 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TMEM63BQ5T3F8 832 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 SAMD5Q5TGI4 173 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 CCSAPQ6IQ19 270 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 CCDC62Q6P9F0 684 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 PSRC1Q6PGN9 363 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 METTL7BQ6UX53 244 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 DEFB128Q7Z7B8 93 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 RSPH3Q86UC2 560 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 ALYREFQ86V81 257 aaKnown RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 PLA2G4DQ86XP0 818 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 FAM126BQ8IXS8 530 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 SIX5Q8N196 739 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 FAM184AQ8NB25 1140 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 PPP1R13LQ8WUF5 828 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TRIM43Q96BQ3 446 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 GPRASP2Q96D09 838 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 ZNF274Q96GC6 653 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 GDF15Q99988 308 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 C22orf23Q9BZE7 217 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 ZMYND15Q9H091 742 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TRPV6Q9H1D0 765 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 ALDH8A1Q9H2A2 487 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 JPH1Q9HDC5 661 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TRMT13Q9NUP7 481 aaKnown RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 TMEM260Q9NX78 707 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 MARK1Q9P0L2 795 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 VPS54Q9P1Q0 977 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 DDX41Q9UJV9 622 aaKnown RBP5.47□□□□□ -1.53
CNOT1-219ENST00000569882 MKL2Q9ULH7 1088 aa5.47□□□□□ -1.53
CNOT1-219ENST00000569882 SCN10AQ9Y5Y9 1956 aa5.46□□□□□ -1.54
CNOT1-219ENST00000569882 H3BRB1 525 aa5.46□□□□□ -1.54
CNOT1-219ENST00000569882 MAFGO15525 162 aa5.46□□□□□ -1.54
CNOT1-219ENST00000569882 FGBP02675 491 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms