RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 PRMT6Q96LA8 375 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 PRPF40AO75400 957 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 CYP21A2P08686 494 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 PSMA3P25788 255 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 GNA11P29992 359 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 CAP2P40123 477 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 TXLNAP40222 546 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 SKIV2L2P42285 1042 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 ZAP70P43403 619 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 FLT3LGP49771 235 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 GUCY2FP51841 1108 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 VGLL4Q14135 290 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 SEMA3AQ14563 771 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 PLA2G4EQ3MJ16 856 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 ARHGEF16Q5VV41 709 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 C7orf61Q8IZ16 206 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 KIAA1524Q8TCG1 905 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 DCAF4Q8WV16 495 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 FAM163AQ96GL9 167 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 PRIMPOLQ96LW4 560 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 JAKMIP1Q96N16 626 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 PPP1R9BQ96SB3 815 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 C4AP0C0L4 1744 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 LRRC72A6NJI9 287 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 BACH1O14867 736 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 IFIT3O14879 490 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 PAHP00439 452 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 GH2P01242 217 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 RPSAP08865 295 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 C6orf222P0C671 652 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 CHKAP35790 457 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 LACTBP83111 547 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 TOB2Q14106 344 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 LBRQ14739 615 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 ME3Q16798 604 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 IFIT1BQ5T764 474 aaKnown RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 POMZP3Q6PJE2 187 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 C7orf43Q8WVR3 580 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 ZSWIM6Q9HCJ5 1215 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 GPCPD1Q9NPB8 672 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 SMYD2Q9NRG4 433 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 HELLSQ9NRZ9 838 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 HNRNPCP07910 306 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMG1-217ENST00000569764 IGFBP4P22692 258 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 SLC12A2P55011 1212 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PPP2R3AQ06190 1150 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 C7orf31Q8N865 590 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 CTNNBL1Q8WYA6 563 aaPredicted RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 SRRTQ9BXP5 876 aaKnown RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 LRRC2Q9BYS8 371 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PLCB1Q9NQ66 1216 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 STK39Q9UEW8 545 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 SEPT3Q9UH03 358 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 TMX2Q9Y320 296 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 LY75O60449 1722 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PHLPP2Q6ZVD8 1323 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 GOLGA6L10A0A0M3HER8 536 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 EIF3FO00303 357 aaPredicted RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 ST18O60284 1047 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 FOXD2O60548 495 aaPredicted RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 OFD1O75665 1012 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 RASGRP1O95267 797 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 HERVK_113P62684 666 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 NEDD9Q14511 834 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 ATP13A4Q4VNC1 1196 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 ASPRV1Q53RT3 343 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 KAZNQ674X7 775 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 NAT8LQ8N9F0 302 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 KBTBD3Q8NAB2 608 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 MIGA1Q8NAN2 632 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PLPP7Q8NBV4 271 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 MSANTD4Q8NCY6 345 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 SCFD2Q8WU76 684 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 HNRNPLLQ8WVV9 542 aaKnown RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 SEPT8Q92599 483 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 SPATA17Q96L03 361 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PUS7LQ9H0K6 701 aaKnown RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 RBSNQ9H1K0 784 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 EHD4Q9H223 541 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 ABHD16BQ9H3Z7 469 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 ZBTB21Q9ULJ3 1066 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 MOXD2PA6NHM9 499 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 SMIM22K7EJ46 135 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 ADCY5O95622 1261 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 FGRP09769 529 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 KCNA3P22001 575 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PHKA1P46020 1223 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 EPHB1P54762 984 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 IFRD2Q12894 506 aaPredicted RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 LAMC2Q13753 1193 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 PDCD2Q16342 344 aaPredicted RBP7.24□□□□□ -1.25
SMG1-217ENST00000569764 GNASQ5JWF2 1037 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 SFMBT2Q5VUG0 894 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 CDC42EP5Q6NZY7 148 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 BTNL9Q6UXG8 535 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 CLEC17AQ6ZS10 378 aa7.24□□□□□ -1.25
SMG1-217ENST00000569764 CCDC84Q86UT8 332 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms