RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 KIFC3Q9BVG8 833 aa22.58■■□□□ 1.2
SPSB3-211ENST00000569380 TMEM106CQ9BVX2 250 aa22.58■■□□□ 1.2
SPSB3-211ENST00000569380 CTNND2Q9UQB3 1225 aa22.58■■□□□ 1.2
SPSB3-211ENST00000569380 COL4A3BPQ9Y5P4 624 aa22.58■■□□□ 1.2
SPSB3-211ENST00000569380 ZNF165P49910 485 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 CLCN3P51790 818 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 ZNF200P98182 395 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-211ENST00000569380 GSE1Q14687 1217 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 ZC2HC1CQ53FD0 456 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-211ENST00000569380 ODR4Q5SWX8 454 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 MARCH8Q5T0T0 291 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 IKZF4Q9H2S9 585 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 TRIP12Q14669 1992 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-211ENST00000569380 KAT6AQ92794 2004 aa22.57■■□□□ 1.2
SPSB3-211ENST00000569380 KLRC1P26715 233 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 RFC5P40937 340 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 PMS1P54277 932 aaKnown RBP22.56■■□□□ 1.2
SPSB3-211ENST00000569380 PEX3P56589 373 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 ZNF484Q5JVG2 852 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 AOPEPQ8N6M6 819 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 MLKLQ8NB16 471 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 LMBR1Q8WVP7 490 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 SLC7A3Q8WY07 619 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 ZNF668Q96K58 619 aaPredicted RBP22.56■■□□□ 1.2
SPSB3-211ENST00000569380 SCN10AQ9Y5Y9 1956 aa22.56■■□□□ 1.2
SPSB3-211ENST00000569380 CCL5P13501 91 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 KCNA1Q09470 495 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 DHX40Q8IX18 779 aaKnown RBP22.55■■□□□ 1.2
SPSB3-211ENST00000569380 ADSSL1Q8N142 457 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 MCPH1Q8NEM0 835 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 MTG1Q9BT17 334 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-211ENST00000569380 MRPL44Q9H9J2 332 aaKnown RBP22.55■■□□□ 1.2
SPSB3-211ENST00000569380 HDAC6Q9UBN7 1215 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 KIAA0100Q14667 2235 aaKnown RBP22.55■■□□□ 1.2
SPSB3-211ENST00000569380 IGKV6-21A0A0C4DH24 114 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 TRIM49BA6NDI0 452 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 PRPF6O94906 941 aaKnown RBP22.55■■□□□ 1.2
SPSB3-211ENST00000569380 PLS3P13797 630 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 GAP43P17677 238 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 IQCB1Q15051 598 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 NELFCDQ8IXH7 590 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 METTL13Q8N6R0 699 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 DRC1Q96MC2 740 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 DEFB118Q96PH6 123 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 ADGRA3Q8IWK6 1321 aa22.55■■□□□ 1.2
SPSB3-211ENST00000569380 SLC16A4O15374 487 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 GCNT3O95395 438 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 GLRA2P23416 452 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 CST5P28325 142 aaPredicted RBP22.54■■□□□ 1.2
SPSB3-211ENST00000569380 ARL2P36404 184 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 EFCAB12Q6NXP0 572 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 MTHFD1LQ6UB35 978 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 FAM200AQ8TCP9 573 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 SCFD1Q8WVM8 642 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 PPP1R16BQ96T49 567 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 RNF208Q9H0X6 261 aa22.54■■□□□ 1.2
SPSB3-211ENST00000569380 FSD2A1L4K1 749 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 HOXD13P35453 343 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 NPTX2P47972 431 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 PSMD2Q13200 908 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 NBPF20Q3BBV1 942 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 L1TD1Q5T7N2 865 aaKnown RBP22.53■■□□□ 1.2
SPSB3-211ENST00000569380 FAM178BQ8IXR5 827 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 NELFBQ8WX92 580 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 TIPINQ9BVW5 301 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 PAK6Q9NQU5 681 aaPredicted RBP22.53■■□□□ 1.2
SPSB3-211ENST00000569380 GRIN2DO15399 1336 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 COL1A2P08123 1366 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 CCDC169A6NNP5 214 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 K7ENM7 598 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 RUFY4Q6ZNE9 571 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 EPM2AIP1Q7L775 607 aaPredicted RBP22.53■■□□□ 1.2
SPSB3-211ENST00000569380 RNF180Q86T96 592 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 PRPF31Q8WWY3 499 aaKnown RBP22.53■■□□□ 1.2
SPSB3-211ENST00000569380 KIFAP3Q92845 792 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 SEMA6BQ9H3T3 888 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 OLFML3Q9NRN5 406 aa22.53■■□□□ 1.2
SPSB3-211ENST00000569380 ZEB2O60315 1214 aa22.52■■□□□ 1.2
SPSB3-211ENST00000569380 MSCO60682 206 aa22.52■■□□□ 1.2
SPSB3-211ENST00000569380 DEKP35659 375 aaKnown RBP22.52■■□□□ 1.2
SPSB3-211ENST00000569380 NCAPHQ15003 741 aa22.52■■□□□ 1.2
SPSB3-211ENST00000569380 ZNF720Q7Z2F6 126 aa22.52■■□□□ 1.2
SPSB3-211ENST00000569380 LINC01465Q8N7H1 131 aa22.52■■□□□ 1.2
SPSB3-211ENST00000569380 TREHO43280 583 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 KPNA6O60684 536 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 ACLYP53396 1101 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 CAPSQ13938 189 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 MYOCDQ8IZQ8 938 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 KATNAL1Q9BW62 490 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 LARSQ9P2J5 1176 aaKnown RBP22.51■■□□□ 1.19
SPSB3-211ENST00000569380 SUCLA2Q9P2R7 463 aaPredicted RBP22.51■■□□□ 1.19
SPSB3-211ENST00000569380 SEL1LQ9UBV2 794 aa22.51■■□□□ 1.19
SPSB3-211ENST00000569380 GOLGA6L3A6NEY3 463 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 ADAM17P78536 824 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 PAK1Q13153 545 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 HSP90AA4PQ58FG1 418 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 EEF2KMTQ96G04 330 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 USP20Q9Y2K6 914 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 PPME1Q9Y570 386 aa22.5■■□□□ 1.19
SPSB3-211ENST00000569380 VTNP04004 478 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms