RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 MAMDC2Q7Z304 686 aaPredicted RBP9.38□□□□□ -0.91
CCDC113-205ENST00000569374 TOP6BLQ8N6T0 577 aa9.38□□□□□ -0.91
CCDC113-205ENST00000569374 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
CCDC113-205ENST00000569374 DDX1Q92499 740 aaKnown RBP9.38□□□□□ -0.91
CCDC113-205ENST00000569374 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
CCDC113-205ENST00000569374 TARS2Q9BW92 718 aaKnown RBP9.38□□□□□ -0.91
CCDC113-205ENST00000569374 TMEM39BQ9GZU3 492 aa9.38□□□□□ -0.91
CCDC113-205ENST00000569374 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
CCDC113-205ENST00000569374 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
CCDC113-205ENST00000569374 DOCK1Q14185 1865 aa9.38□□□□□ -0.91
CCDC113-205ENST00000569374 PNMA6EA0A0J9YXQ4 647 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 TCP10L2B9ZVM9 353 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 SIGLEC6O43699 453 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 NPTXRO95502 500 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 ASLP04424 464 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 NOS3P29474 1203 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 PRDX5P30044 214 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 PHKA1P46020 1223 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 RBM5P52756 815 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC113-205ENST00000569374 POU4F1Q01851 419 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 SFRP5Q5T4F7 317 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
CCDC113-205ENST00000569374 ITPRIPQ8IWB1 547 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 TMEM57Q8N5G2 664 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 ATL2Q8NHH9 583 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 MAGEB10Q96LZ2 347 aaPredicted RBP9.37□□□□□ -0.91
CCDC113-205ENST00000569374 UBL7Q96S82 380 aaPredicted RBP9.37□□□□□ -0.91
CCDC113-205ENST00000569374 MCOLN1Q9GZU1 580 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 GFOD1Q9NXC2 390 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 ZNF70Q9UC06 446 aaPredicted RBP9.37□□□□□ -0.91
CCDC113-205ENST00000569374 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
CCDC113-205ENST00000569374 B4E1Z4 1266 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 SCG5P05408 212 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 SDSP20132 328 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
CCDC113-205ENST00000569374 CDK5R2Q13319 367 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 PUM3Q15397 648 aaKnown RBP9.36□□□□□ -0.91
CCDC113-205ENST00000569374 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 SEZ6L2Q6UXD5 910 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 DDX42Q86XP3 938 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC113-205ENST00000569374 APOBEC3FQ8IUX4 373 aaKnown RBP9.36□□□□□ -0.91
CCDC113-205ENST00000569374 FAM20CQ8IXL6 584 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 GSTCDQ8NEC7 633 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 GCC1Q96CN9 775 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 ZDHHC15Q96MV8 337 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 DUSP23Q9BVJ7 150 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 API5Q9BZZ5 524 aaKnown RBP9.36□□□□□ -0.91
CCDC113-205ENST00000569374 KCNF1Q9H3M0 494 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 TRIM39Q9HCM9 518 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 CHST7Q9NS84 486 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 RNF112Q9ULX5 631 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
CCDC113-205ENST00000569374 CENPFP49454 3210 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 IGF2BP3O00425 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC113-205ENST00000569374 AQP7O14520 342 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 DHX15O43143 795 aaKnown RBP9.35□□□□□ -0.91
CCDC113-205ENST00000569374 OPA1O60313 960 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 GSNP06396 782 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 C6orf222P0C671 652 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-205ENST00000569374 NEK4P51957 841 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 FKBP1AP62942 108 aaKnown RBP9.35□□□□□ -0.91
CCDC113-205ENST00000569374 ATP2B3Q16720 1220 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 DDX60LQ5H9U9 1706 aaKnown RBP9.35□□□□□ -0.91
CCDC113-205ENST00000569374 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 LCE2CQ5TA81 110 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 BRAPQ7Z569 592 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 JAMLQ86YT9 394 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 ENOX1Q8TC92 643 aaKnown RBP9.35□□□□□ -0.91
CCDC113-205ENST00000569374 ZNF384Q8TF68 577 aa9.35□□□□□ -0.91
CCDC113-205ENST00000569374 DYNC1LI2O43237 492 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 USP2O75604 605 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 DNAJC8O75937 253 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 EOMESO95936 686 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 POU3F2P20265 443 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 IGFALSP35858 605 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 NOP2P46087 812 aaKnown RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 TFCP2Q12800 502 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 NFIAQ12857 509 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 NMIQ13287 307 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 APOBEC3HQ6NTF7 200 aaKnown RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 UBE2R2Q712K3 238 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 ZFPM1Q8IX07 1006 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 SMC5Q8IY18 1101 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 AFAP1L2Q8N4X5 818 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 UBR7Q8N806 425 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 DTWD2Q8NBA8 298 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 SLC7A14Q8TBB6 771 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 WNK4Q96J92 1243 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 C1GALT1Q9NS00 363 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 GPR55Q9Y2T6 319 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-205ENST00000569374 MGAMO43451 1857 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 BRCA2P51587 3418 aa9.34□□□□□ -0.91
CCDC113-205ENST00000569374 SRGAP3O43295 1099 aa9.33□□□□□ -0.92
CCDC113-205ENST00000569374 ECI1P42126 302 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms