RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TBR1	Q16650	682 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	OTOP2	Q7RTS6	562 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	OVCH1	Q7RTY7	1134 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	ASB15	Q8WXK1	588 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	E2F7	Q96AV8	911 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	GBP4	Q96PP9	640 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	SLC12A8	A0AV02	714 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	KRTAP23-1	A1A580	65 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	CCDC85C	A6NKD9	419 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	FOXP2	O15409	715 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	SLC26A4	O43511	780 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	RHOBTB3	O94955	611 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	MME	P08473	750 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	APEX1	P27695	318 aa	Known RBP	5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	CD38	P28907	300 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	MC4R	P32245	332 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	SLC25A3	Q00325	362 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	CRHR2	Q13324	411 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	RRP1B	Q14684	758 aa	Known RBP	5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	ARHGAP44	Q17R89	818 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	OTOP1	Q7RTM1	612 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	ADGRG3	Q86Y34	549 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	RTKN2	Q8IZC4	609 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	THAP3	Q8WTV1	239 aa	Predicted RBP	5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	MPHOSPH9	Q99550	1183 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	NRDE2	Q9H7Z3	1164 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	UCKL1	Q9NWZ5	548 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	NDOR1	Q9UHB4	597 aa		5.25	□□□□□ -1.57
UBR1-209	ENST00000569243	TCRBV16S1A1N1	A0A5B0	115 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	ZAR1L	A6NP61	321 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	CAPN14	A8MX76	684 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	HIP1R	O75146	1068 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	ADCY8	P40145	1251 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	SLC7A14	Q8TBB6	771 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	SCLY	Q96I15	445 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	FOXB1	Q99853	325 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	KIAA1683	Q9H0B3	1180 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	SNTG2	Q9NY99	539 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	SFMBT1	Q9UHJ3	866 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	CDC42EP3	Q9UKI2	254 aa		5.24	□□□□□ -1.57
UBR1-209	ENST00000569243	FAM221B	A6H8Z2	402 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243		B4E1Z4	1266 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	SCD	O00767	359 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	CYP27B1	O15528	508 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	KCNA6	P17658	529 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	FNTB	P49356	437 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	GRM7	Q14831	915 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	LRSAM1	Q6UWE0	723 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	FILIP1	Q7Z7B0	1213 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	VRK3	Q8IV63	474 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	D2HGDH	Q8N465	521 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	HIPK4	Q8NE63	616 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	RABGGTA	Q92696	567 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	DNAJC7	Q99615	494 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	BOC	Q9BWV1	1114 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	COQ6	Q9Y2Z9	468 aa		5.23	□□□□□ -1.57
UBR1-209	ENST00000569243	PRAMEF22	A3QJZ6	481 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	RASSF10	A6NK89	507 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	KCNK3	O14649	394 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	RASGRP1	O95267	797 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	ALDH6A1	Q02252	535 aa	Known RBP	5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	TM4SF20	Q53R12	229 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	TMEM177	Q53S58	311 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	CATSPERE	Q5SY80	951 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	GPR135	Q8IZ08	494 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	CISD2	Q8N5K1	135 aa	Known RBP	5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	C2orf69	Q8N8R5	385 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	SHCBP1	Q8NEM2	672 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	GFM2	Q969S9	779 aa	Known RBP	5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	PODXL2	Q9NZ53	605 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	PACSIN3	Q9UKS6	424 aa		5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.22	□□□□□ -1.57
UBR1-209	ENST00000569243	H2AFY	O75367	372 aa	Known RBP	5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	ZBTB48	P10074	688 aa	Predicted RBP	5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	MECP2	P51608	486 aa	Known RBP	5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	C2orf27A	Q580R0	203 aa		5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	LCE1A	Q5T7P2	110 aa		5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	KLHDC10	Q6PID8	442 aa		5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	BCL6B	Q8N143	479 aa	Predicted RBP	5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	TMEM176A	Q96HP8	235 aa		5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	TRIM39	Q9HCM9	518 aa		5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	ACSS2	Q9NR19	701 aa		5.21	□□□□□ -1.58
UBR1-209	ENST00000569243	PLD2	O14939	933 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	ADCY7	P51828	1080 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	IRF9	Q00978	393 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	TMEM132B	Q14DG7	1078 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	STRIP1	Q5VSL9	837 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	BRAP	Q7Z569	592 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	MRGPRE	Q86SM8	312 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	DDX53	Q86TM3	631 aa	Known RBP	5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	NME9	Q86XW9	330 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	ANKRD35	Q8N283	1001 aa		5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	SRPK1	Q96SB4	655 aa	Known RBP	5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	SLC6A15	Q9H2J7	730 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms