RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TMEM40Q8WWA1 233 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 GCOM2Q9BZD3 368 aaPredicted RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 BHMT2Q9H2M3 363 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 DHX33Q9H6R0 707 aaKnown RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 MSRAQ9UJ68 235 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 DBR1Q9UK59 544 aaKnown RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 DNM3Q9UQ16 869 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 NOC2LQ9Y3T9 749 aaKnown RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 COL4A3BPQ9Y5P4 624 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 A0A087WZ62 844 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 IGKV6-21A0A0C4DH24 114 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 DENND3A2RUS2 1198 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 E9PMD0 336 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 GPR182O15218 404 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 UPP2O95045 317 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDT1-203ENST00000569140 MUTP22033 750 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 FGFR4P22455 802 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 LONP1P36776 959 aaKnown RBP14.25□□□□□ -0.13
CDT1-203ENST00000569140 SMAD3P84022 425 aaKnown RBP14.25□□□□□ -0.13
CDT1-203ENST00000569140 GRIN1Q05586 938 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
CDT1-203ENST00000569140 PTPAQ15257 358 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 SPECC1Q5M775 1068 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 FAM102BQ5T8I3 360 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 PADI6Q6TGC4 694 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 CALML4Q96GE6 196 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 AK8Q96MA6 479 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 FDXACB1Q9BRP7 624 aaPredicted RBP14.25□□□□□ -0.13
CDT1-203ENST00000569140 CSRNP2Q9H175 543 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 POLR3FQ9H1D9 316 aaPredicted RBP14.25□□□□□ -0.13
CDT1-203ENST00000569140 ADAMTS10Q9H324 1103 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 PADI3Q9ULW8 664 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 LOXHD1Q8IVV2 1947 aa14.25□□□□□ -0.13
CDT1-203ENST00000569140 TET1Q8NFU7 2136 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 CSDE1O75534 798 aaKnown RBP14.24□□□□□ -0.13
CDT1-203ENST00000569140 DNAJB2P25686 324 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 ANP32AP39687 249 aaKnown RBP14.24□□□□□ -0.13
CDT1-203ENST00000569140 TXLNAP40222 546 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 PBX2P40425 430 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 CDC42EP1Q00587 391 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 LAMTOR4Q0VGL1 99 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 TFDP1Q14186 410 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 RAB30Q15771 203 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 ZNF697Q5TEC3 545 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 HERC6Q8IVU3 1022 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 PRPF31Q8WWY3 499 aaKnown RBP14.24□□□□□ -0.13
CDT1-203ENST00000569140 FAM161BQ96MY7 647 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 CLIC6Q96NY7 704 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
CDT1-203ENST00000569140 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 GPRC5CQ9NQ84 441 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 XPNPEP1Q9NQW7 623 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 ST3GAL5Q9UNP4 418 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 SQORQ9Y6N5 450 aa14.24□□□□□ -0.13
CDT1-203ENST00000569140 TLL1O43897 1013 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 EYA4O95677 639 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 DARSP14868 501 aaKnown RBP14.23□□□□□ -0.13
CDT1-203ENST00000569140 MYOGP15173 224 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 SFPQP23246 707 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDT1-203ENST00000569140 EIF4BP23588 611 aaKnown RBP14.23□□□□□ -0.13
CDT1-203ENST00000569140 GRB10Q13322 594 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
CDT1-203ENST00000569140 ZNF410Q86VK4 478 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 FAM228AQ86W67 206 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
CDT1-203ENST00000569140 RNF149Q8NC42 400 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 MCPH1Q8NEM0 835 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 TIFAQ96CG3 184 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 FTHL17Q9BXU8 183 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 INO80BQ9C086 356 aaPredicted RBP14.23□□□□□ -0.13
CDT1-203ENST00000569140 NKX2-4Q9H2Z4 354 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 ERVK-5Q9HDB9 667 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 FBXO2Q9UK22 296 aaPredicted RBP14.23□□□□□ -0.13
CDT1-203ENST00000569140 MICAL3Q7RTP6 2002 aa14.23□□□□□ -0.13
CDT1-203ENST00000569140 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
CDT1-203ENST00000569140 LRRIQ4A6NIV6 560 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 SPTLC2O15270 562 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 ASAP2O43150 1006 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 ZSCAN20P17040 1043 aaPredicted RBP14.22□□□□□ -0.13
CDT1-203ENST00000569140 PHKA2P46019 1235 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
CDT1-203ENST00000569140 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
CDT1-203ENST00000569140 MXD4Q14582 209 aaPredicted RBP14.22□□□□□ -0.13
CDT1-203ENST00000569140 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 KARSQ15046 597 aaKnown RBP14.22□□□□□ -0.13
CDT1-203ENST00000569140 Q7L0L9 218 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 KCNK18Q7Z418 384 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 LINC00301Q8NCQ3 95 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 ASAP3Q8TDY4 903 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 EPSTI1Q96J88 318 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 PNMA5Q96PV4 448 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 POLD4Q9HCU8 107 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 LRFN2Q9ULH4 789 aa14.22□□□□□ -0.13
CDT1-203ENST00000569140 PCDHA11Q9Y5I1 949 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms