RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
USB1-214ENST00000568848 ZNF862O60290 1169 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 B4GALT3O60512 393 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
USB1-214ENST00000568848 MYBP10242 640 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 NECTIN1Q15223 517 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 SLC39A11Q8N1S5 342 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 CDCA3Q99618 268 aaPredicted RBP16.86■□□□□ 0.29
USB1-214ENST00000568848 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 ANO2Q9NQ90 1003 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 LIMD1Q9UGP4 676 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 COL1A2P08123 1366 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
USB1-214ENST00000568848 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 EDIL3O43854 480 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 EFCAB12Q6NXP0 572 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 SGMS1Q86VZ5 419 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 LINC01465Q8N7H1 131 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 BARHL2Q9NY43 387 aa16.85■□□□□ 0.29
USB1-214ENST00000568848 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 GALR2O43603 387 aaPredicted RBP16.84■□□□□ 0.29
USB1-214ENST00000568848 CHMP2AO43633 222 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 SLC26A2P50443 739 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 PRR16Q569H4 304 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 FRMD5Q7Z6J6 570 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 MRPL43Q8N983 215 aaKnown RBP16.84■□□□□ 0.29
USB1-214ENST00000568848 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
USB1-214ENST00000568848 TNPO1Q92973 898 aaKnown RBP16.84■□□□□ 0.29
USB1-214ENST00000568848 SPG21Q9NZD8 308 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
USB1-214ENST00000568848 LZTS1Q9Y250 596 aa16.84■□□□□ 0.29
USB1-214ENST00000568848 MAFBQ9Y5Q3 323 aaPredicted RBP16.84■□□□□ 0.29
USB1-214ENST00000568848 ZBTB43O43298 467 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 CXCL14O95715 111 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 FOSP01100 380 aaPredicted RBP16.83■□□□□ 0.28
USB1-214ENST00000568848 ADD1P35611 737 aaKnown RBP16.83■□□□□ 0.28
USB1-214ENST00000568848 GPC3P51654 580 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 BCAR1P56945 870 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 TMC5Q6UXY8 1006 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 ZNF598Q86UK7 904 aaKnown RBP16.83■□□□□ 0.28
USB1-214ENST00000568848 ST13P5Q8NFI4 369 aaPredicted RBP16.83■□□□□ 0.28
USB1-214ENST00000568848 CASP10Q92851 521 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 MTA3Q9BTC8 594 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 VN1R3Q9BXE9 311 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 ELAC1Q9H777 363 aaKnown RBP16.83■□□□□ 0.28
USB1-214ENST00000568848 SORCS3Q9UPU3 1222 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 SAMM50Q9Y512 469 aa16.83■□□□□ 0.28
USB1-214ENST00000568848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.82■□□□□ 0.28
USB1-214ENST00000568848 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 PI15O43692 258 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
USB1-214ENST00000568848 SSBP05455 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
USB1-214ENST00000568848 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 EXOSC10Q01780 885 aaKnown RBP16.82■□□□□ 0.28
USB1-214ENST00000568848 PRKCEQ02156 737 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 AP3B2Q13367 1082 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 MTMR3Q13615 1198 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 SMC1AQ14683 1233 aaKnown RBP16.82■□□□□ 0.28
USB1-214ENST00000568848 PKN1Q16512 942 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
USB1-214ENST00000568848 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
USB1-214ENST00000568848 VPS52Q8N1B4 723 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 FLCNQ8NFG4 579 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 LENG9Q96B70 501 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 PRRX2Q99811 253 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 GBP3Q9H0R5 595 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 NGRNQ9NPE2 291 aaKnown RBP16.82■□□□□ 0.28
USB1-214ENST00000568848 C2orf16Q68DN1 1984 aa16.82■□□□□ 0.28
USB1-214ENST00000568848 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
USB1-214ENST00000568848 EIF4BP23588 611 aaKnown RBP16.81■□□□□ 0.28
USB1-214ENST00000568848 KRT17Q04695 432 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 NIPA1Q7RTP0 329 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 KSR1Q8IVT5 923 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
USB1-214ENST00000568848 DNAJB4Q9UDY4 337 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 DENND4AQ7Z401 1863 aa16.81■□□□□ 0.28
USB1-214ENST00000568848 OATP04181 439 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 PSAPP07602 524 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
USB1-214ENST00000568848 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
USB1-214ENST00000568848 CES5AQ6NT32 575 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 ZNF746Q6NUN9 644 aaPredicted RBP16.8■□□□□ 0.28
USB1-214ENST00000568848 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 PHKBQ93100 1093 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 UNC45AQ9H3U1 944 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms