RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 SEPT1Q8WYJ6 367 aa13.56□□□□□ -0.24
VPS9D1-207ENST00000568691 HINFPQ9BQA5 517 aa13.56□□□□□ -0.24
VPS9D1-207ENST00000568691 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
VPS9D1-207ENST00000568691 FRYQ5TBA9 3013 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 B4E1Z4 1266 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 LRRN2O75325 713 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 ADRB1P08588 477 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 CFHP08603 1231 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 ITGB5P18084 799 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 EVCP57679 992 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 NUCB2P80303 420 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 KRT76Q01546 638 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 PLCB4Q15147 1175 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 ATAT1Q5SQI0 421 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 TMEM173Q86WV6 379 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 KRT23Q9C075 422 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 RIOX1Q9H6W3 641 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 TBC1D17Q9HA65 648 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 TMEM161AQ9NX61 479 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 WNT16Q9UBV4 365 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 PUF60Q9UHX1 559 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 FBXL21Q9UKT6 434 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 ST3GAL5Q9UNP4 418 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 PKD1L2Q7Z442 2459 aa13.55□□□□□ -0.24
VPS9D1-207ENST00000568691 FASNP49327 2511 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 ZFYVE26Q68DK2 2539 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 COL4A3Q01955 1670 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 RRN3P2A6NIE6 340 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 CPA1P15085 419 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 SEC23AQ15436 765 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 CLLU1OSQ5K130 101 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 USP17L6PQ6QN14 398 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 FAM228AQ86W67 206 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 KIAA0319LQ8IZA0 1049 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 GLG1Q92896 1179 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 ZNF558Q96NG5 402 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 TMEM117Q9H0C3 514 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 SMARCAD1Q9H4L7 1026 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 C1orf112Q9NSG2 853 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 SPG21Q9NZD8 308 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 FAM208BQ5VWN6 2430 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 NID2Q14112 1375 aa13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 BAZ2BQ9UIF8 2168 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-207ENST00000568691 NT5C1B-RDH14C9J2C7 533 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 MEIS2O14770 477 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 ZZEF1O43149 2961 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 CXCL14O95715 111 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 FGD1P98174 961 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 TBC1D8BQ0IIM8 1120 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 XRRA1Q6P2D8 792 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 Q6ZUG5 572 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 C1orf210Q8IVY1 113 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 BCL7CQ8WUZ0 217 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 VN1R3Q9BXE9 311 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 ZBP1Q9H171 429 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 DZANK1Q9NVP4 752 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 CA14Q9ULX7 337 aa13.53□□□□□ -0.24
VPS9D1-207ENST00000568691 SPEGQ15772 3267 aa13.52□□□□□ -0.24
VPS9D1-207ENST00000568691 DENND3A2RUS2 1198 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 RPS6KA5O75582 802 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 RPLP2P05387 115 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 WTAPQ15007 396 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 OTOP3Q7RTS5 596 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 IQCA1Q86XH1 822 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 SLC44A3Q8N4M1 653 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 GTF3C6Q969F1 213 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 GINS2Q9Y248 185 aa13.52□□□□□ -0.25
VPS9D1-207ENST00000568691 ZBTB42B2RXF5 422 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 M0QZ92 97 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 PRC1O43663 620 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 PPM1AP35813 382 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 RCAN1P53805 252 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 KRT17Q04695 432 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 ME3Q16798 604 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 CCDC149Q6ZUS6 474 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 NME8Q8N427 588 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 GPRASP2Q96D09 838 aa13.51□□□□□ -0.25
VPS9D1-207ENST00000568691 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms