RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CEP89Q96ST8 783 aa16.19■□□□□ 0.18
CMTM3-215ENST00000568477 JPH2Q9BR39 696 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-215ENST00000568477 SH2D3AQ9BRG2 576 aa16.19■□□□□ 0.18
CMTM3-215ENST00000568477 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
CMTM3-215ENST00000568477 PLVAPQ9BX97 442 aa16.19■□□□□ 0.18
CMTM3-215ENST00000568477 LMAN2LQ9H0V9 348 aa16.19■□□□□ 0.18
CMTM3-215ENST00000568477 REV3LO60673 3130 aa16.19■□□□□ 0.18
CMTM3-215ENST00000568477 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 MAFO75444 373 aaPredicted RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 BMP1P13497 986 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 DARSP14868 501 aaKnown RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 ZSCAN20P17040 1043 aaPredicted RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 DRP2Q13474 957 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 PLA2G4FQ68DD2 849 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 UHRF1Q96T88 793 aaPredicted RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 LXNQ9BS40 222 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 NSUN3Q9H649 340 aaKnown RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
CMTM3-215ENST00000568477 ATP6V0A4Q9HBG4 840 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 CYP26B1Q9NR63 512 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 BDP1A6H8Y1 2624 aa16.18■□□□□ 0.18
CMTM3-215ENST00000568477 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
CMTM3-215ENST00000568477 GRM6O15303 877 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 NEMFO60524 1076 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 FAM189BP81408 668 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 SPIRE1Q08AE8 756 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 CALCRLQ16602 461 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 NAALADL2Q58DX5 795 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 P2RX5Q93086 422 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 C8orf76Q96K31 380 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 KIF2CQ99661 725 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 ELAC1Q9H777 363 aaKnown RBP16.17■□□□□ 0.18
CMTM3-215ENST00000568477 SH2B1Q9NRF2 756 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-215ENST00000568477 SUCLA2Q9P2R7 463 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-215ENST00000568477 PPME1Q9Y570 386 aa16.17■□□□□ 0.18
CMTM3-215ENST00000568477 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 TNFRSF10AO00220 468 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 NPEPPSP55786 919 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
CMTM3-215ENST00000568477 TCEAL5Q5H9L2 206 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 ZNF410Q86VK4 478 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 RHPN2Q8IUC4 686 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 C4orf19Q8IY42 314 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 EXOC8Q8IYI6 725 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 DYDC2Q96IM9 177 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 CEP170P1Q96L14 293 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 ZSWIM4Q9H7M6 989 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 WRAP73Q9P2S5 460 aaPredicted RBP16.16■□□□□ 0.18
CMTM3-215ENST00000568477 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
CMTM3-215ENST00000568477 A0A087WZ62 844 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 HOXA2O43364 376 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 FGFR1P11362 822 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 FGFR4P22455 802 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 KCNA5P22460 613 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 RFC5P40937 340 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 RBM25P49756 843 aaKnown RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 POLGP54098 1239 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 CYP4A11Q02928 519 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 CTTNQ14247 550 aaKnown RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 SPOUT1Q5T280 376 aaKnown RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 FAM102BQ5T8I3 360 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 OTUD6AQ7L8S5 288 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 FAM184AQ8NB25 1140 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 FDXACB1Q9BRP7 624 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 INO80BQ9C086 356 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 ALG13Q9NP73 1137 aaKnown RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
CMTM3-215ENST00000568477 TCF20Q9UGU0 1960 aaKnown RBP16.15■□□□□ 0.18
CMTM3-215ENST00000568477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-215ENST00000568477 WNT7AO00755 349 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 ITGB1P05556 798 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 XKR9Q5GH70 373 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 ECHDC2Q86YB7 292 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 TPH2Q8IWU9 490 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 ZNF579Q8NAF0 562 aaKnown RBP16.14■□□□□ 0.17
CMTM3-215ENST00000568477 KLHL23Q8NBE8 558 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 NEK9Q8TD19 979 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 NLRP4Q96MN2 994 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 NECAB3Q96P71 396 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-215ENST00000568477 EIF2AK1Q9BQI3 630 aaKnown RBP16.14■□□□□ 0.17
CMTM3-215ENST00000568477 TMEM117Q9H0C3 514 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.17
CMTM3-215ENST00000568477 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-215ENST00000568477 AAASQ9NRG9 546 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 PCDHB12Q9Y5F1 795 aa16.14■□□□□ 0.17
CMTM3-215ENST00000568477 KIAA1671Q9BY89 1806 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 NCK2O43639 380 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 GAS2O43903 313 aaKnown RBP16.13■□□□□ 0.17
CMTM3-215ENST00000568477 CSDE1O75534 798 aaKnown RBP16.13■□□□□ 0.17
CMTM3-215ENST00000568477 CSPG5O95196 566 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 TXKP42681 527 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms