RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 HOXA2O43364 376 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PRPF3O43395 683 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 LPXNO60711 386 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ARHGEF15O94989 841 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PSAPP07602 524 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ARP10275 920 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 KLRC1P26715 233 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 TMOD1P28289 359 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CTNNB1P35222 781 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ADD1P35611 737 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 BMPR1AP36894 532 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 SREBF1P36956 1147 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 KCNQ1P51787 676 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 SETQ01105 290 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 KRT76Q01546 638 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 APOBRQ0VD83 1088 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 NFX1Q12986 1120 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 NR1H3Q13133 447 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PAK2Q13177 524 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 BTG3Q14201 252 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PLCB4Q15147 1175 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 TCTN1Q2MV58 587 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ADCK5Q3MIX3 580 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ZNF484Q5JVG2 852 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 FBXO47Q5MNV8 452 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 SPOUT1Q5T280 376 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 SWSAP1Q6NVH7 229 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PDXDC2PQ6P474 469 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CPLX2Q6PUV4 134 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 MTHFD1LQ6UB35 978 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 RUFY4Q6ZNE9 571 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 SMAP1Q8IYB5 467 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 REXO1Q8N1G1 1221 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CYP2W1Q8TAV3 490 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 FAM200AQ8TCP9 573 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 BRF1Q92994 677 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PGBD1Q96JS3 809 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PLVAPQ9BX97 442 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CELF4Q9BZC1 486 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 C22orf23Q9BZE7 217 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 AGO4Q9HCK5 861 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ZNF302Q9NR11 478 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 AAASQ9NRG9 546 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 NRBP2Q9NSY0 501 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 RABGEF1Q9UJ41 708 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CEP131Q9UPN4 1083 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 GINS2Q9Y248 185 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PCDHB7Q9Y5E2 793 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 TRPV2Q9Y5S1 764 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 BRWD1Q9NSI6 2320 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ESYT2A0FGR8 921 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 DENND3A2RUS2 1198 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 GPR182O15218 404 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 MAGEB2O15479 319 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 RPS6KA5O75582 802 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 DKK1O94907 266 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 CYP3A4P08684 503 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ZSCAN20P17040 1043 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 XBP1P17861 261 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 COL9A1P20849 921 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 IBSPP21815 317 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 KCNA5P22460 613 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 CDC27P30260 824 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 CD52P31358 61 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 HSPA4P34932 840 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 USP11P51784 963 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 NLRP5P59047 1200 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 MCCD1P59942 119 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 SSRP1Q08945 709 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM62Q0P6H9 643 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 FUT2Q10981 343 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 LPIN1Q14693 890 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 OCLNQ16625 522 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 LEXMQ3ZCV2 418 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 PRR16Q569H4 304 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 MARCH8Q5T0T0 291 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ZNF746Q6NUN9 644 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ABHD15Q6UXT9 468 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 TRMT1LQ7Z2T5 733 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 LAPTM4BQ86VI4 370 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 METTL13Q8N6R0 699 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ANKK1Q8NFD2 765 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ATP8B4Q8TF62 1192 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 FAM167AQ96KS9 214 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 SLC26A6Q9BXS9 759 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 ZMYND12Q9H0C1 365 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 LMAN2LQ9H0V9 348 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 NSUN3Q9H649 340 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 UBE2ZQ9H832 354 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 SH3GLB2Q9NR46 395 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 C1orf112Q9NSG2 853 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 TMEM260Q9NX78 707 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 PADI3Q9ULW8 664 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 TELO2Q9Y4R8 837 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 PCDHB12Q9Y5F1 795 aa5.27□□□□□ -1.57
HERPUD1-213ENST00000568358 PCDHA10Q9Y5I2 948 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms