RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	NLRP7	Q8WX94	980 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	CLP1	Q92989	425 aa	Known RBP	7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	SCLT1	Q96NL6	688 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	CEP89	Q96ST8	783 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	OSMR	Q99650	979 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	KIF2C	Q99661	725 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	PLVAP	Q9BX97	442 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	SEPT9	Q9UHD8	586 aa	Predicted RBP	7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	VAV3	Q9UKW4	847 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	PCDHA12	Q9UN75	941 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	EYS	Q5T1H1	3165 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	BDP1	A6H8Y1	2624 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	COL4A6	Q14031	1691 aa		7.76	□□□□□ -1.17
SF3B3-209	ENST00000567635	ARID2	Q68CP9	1835 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	PLXNA4	Q9HCM2	1894 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	IGKV6-21	A0A0C4DH24	114 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	TMEM150B	A6NC51	233 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	MAF	O75444	373 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	BMP1	P13497	986 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	DARS	P14868	501 aa	Known RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	ZSCAN20	P17040	1043 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	IBSP	P21815	317 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	RBM25	P49756	843 aa	Known RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	GPC3	P51654	580 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	TFF2	Q03403	129 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	ST3GAL1	Q11201	340 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	CALCRL	Q16602	461 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	NAALADL2	Q58DX5	795 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	NCAPH2	Q6IBW4	605 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	ANO5	Q75V66	913 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	OTUD6A	Q7L8S5	288 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	C4orf19	Q8IY42	314 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	C8orf76	Q96K31	380 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	ZNF668	Q96K58	619 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	JPH2	Q9BR39	696 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	SH2D3A	Q9BRG2	576 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	GCOM2	Q9BZD3	368 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	RC3H2	Q9HBD1	1191 aa	Known RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	ATP6V0A4	Q9HBG4	840 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	CYP26B1	Q9NR63	512 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	RGL1	Q9NZL6	768 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	SUCLA2	Q9P2R7	463 aa	Predicted RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	PPME1	Q9Y570	386 aa		7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635	MRPL42	Q9Y6G3	142 aa	Known RBP	7.75	□□□□□ -1.17
SF3B3-209	ENST00000567635		A0A087WZ62	844 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	TBKBP1	A7MCY6	615 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	GRM6	O15303	877 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	SLITRK3	O94933	977 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	LINC00271	P0C7V0	271 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	RFC5	P40937	340 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	TXK	P42681	527 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	KCNQ1	P51787	676 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	NPEPPS	P55786	919 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	HMGN5	P82970	282 aa	Known RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	GUCY1B3	Q02153	619 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	SPIRE1	Q08AE8	756 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	DRP2	Q13474	957 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	CTTN	Q14247	550 aa	Known RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	PAN2	Q504Q3	1202 aa	Known RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	FAM102B	Q5T8I3	360 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	PLA2G4F	Q68DD2	849 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	ZNF410	Q86VK4	478 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	RHPN2	Q8IUC4	686 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	TPH2	Q8IWU9	490 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	ZNF579	Q8NAF0	562 aa	Known RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	ADAMTS19	Q8TE59	1207 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	SLC7A3	Q8WY07	619 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	P2RX5	Q93086	422 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	DYDC2	Q96IM9	177 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	CEP170P1	Q96L14	293 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	HSD17B14	Q9BPX1	270 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	EIF2AK1	Q9BQI3	630 aa	Known RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	FDXACB1	Q9BRP7	624 aa	Predicted RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	INO80B	Q9C086	356 aa	Predicted RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	LMAN2L	Q9H0V9	348 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	FOXP1	Q9H334	677 aa	Predicted RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	ELAC1	Q9H777	363 aa	Known RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	ZSWIM4	Q9H7M6	989 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	TTC12	Q9H892	705 aa	Predicted RBP	7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	CHST12	Q9NRB3	414 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	TMEM161A	Q9NX61	479 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	PLAGL2	Q9UPG8	496 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	MYO10	Q9HD67	2058 aa		7.74	□□□□□ -1.17
SF3B3-209	ENST00000567635	MYH11	P35749	1972 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	TRIP11	Q15643	1979 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635		A0A0U1RQF3	1178 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	TNFRSF10A	O00220	468 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	ZBTB39	O15060	712 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	ASAP2	O43150	1006 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	HOXA2	O43364	376 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	NCK2	O43639	380 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	NEMF	O60524	1076 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	CSDE1	O75534	798 aa	Known RBP	7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	EOMES	O95936	686 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	ITGB1	P05556	798 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	FGFR1	P11362	822 aa		7.73	□□□□□ -1.17
SF3B3-209	ENST00000567635	XRCC6	P12956	609 aa	Known RBP eCLIP	7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms