RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 PPP1R13BQ96KQ4 1090 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 TTYH3Q9C0H2 523 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
BBS4-213ENST00000567279 TMEM206Q9H813 350 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 CPA4Q9UI42 421 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 FAM184BQ9ULE4 1060 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 CAPN11Q9UMQ6 739 aa12.88□□□□□ -0.35
BBS4-213ENST00000567279 RASSF10A6NK89 507 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 IGF2BP3O00425 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
BBS4-213ENST00000567279 CCP110O43303 1012 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 STRNO43815 780 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 NPTX2P47972 431 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 STAT5BP51692 787 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 SMTNP53814 917 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 GRB14Q14449 540 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 TCERG1LQ5VWI1 586 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 RGMBQ6NW40 437 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 PLEKHH3Q7Z736 793 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 FAM186BQ8IYM0 893 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 RETREG2Q8NC44 543 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 BSNDQ8WZ55 320 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 GPR20Q99678 358 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 KIFC3Q9BVG8 833 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 ST6GALNAC4Q9H4F1 302 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 FAM207AQ9NSI2 230 aaPredicted RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 XRCC5P13010 732 aaKnown RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 FECHP22830 423 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 MAPK4P31152 587 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 GTF2BQ00403 316 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 PPP2R3AQ06190 1150 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 KCNH2Q12809 1159 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 MTF1Q14872 753 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 TAF1CQ15572 869 aaPredicted RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 TSR1Q2NL82 804 aaKnown RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 HSDL1Q3SXM5 330 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 TMEM63BQ5T3F8 832 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 SAPCD2Q86UD0 394 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 TRIM50Q86XT4 487 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 NEK11Q8NG66 645 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 AFAP1L1Q8TED9 768 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 GLG1Q92896 1179 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 PDLIM7Q9NR12 457 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 NRBP2Q9NSY0 501 aa12.87□□□□□ -0.35
BBS4-213ENST00000567279 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
BBS4-213ENST00000567279 TISP43B9A030 160 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
BBS4-213ENST00000567279 MARK3P27448 753 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
BBS4-213ENST00000567279 FIGNQ5HY92 759 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 OR8K1Q8NGG5 319 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 FAM167AQ96KS9 214 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 LSM14BQ9BX40 385 aaKnown RBP12.86□□□□□ -0.35
BBS4-213ENST00000567279 C17orf75Q9HAS0 396 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 AGPAT5Q9NUQ2 364 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
BBS4-213ENST00000567279 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 ADGRA2Q96PE1 1338 aa12.86□□□□□ -0.35
BBS4-213ENST00000567279 A0A1W2PQJ5 194 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 EPHB6O15197 1021 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 ZSCAN12O43309 604 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 EXOC3O60645 756 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 LGR5O75473 907 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 SLC10A3P09131 477 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 TNNT1P13805 278 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 RTP1P59025 263 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 ZBED6P86452 979 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 CYP26C1Q6V0L0 522 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
BBS4-213ENST00000567279 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 ZNF397Q8NF99 534 aaPredicted RBP12.85□□□□□ -0.35
BBS4-213ENST00000567279 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 CRACR2AQ9BSW2 395 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
BBS4-213ENST00000567279 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms