RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 IL9P15248 144 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-216ENST00000567023 PSMC5P62195 406 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 UBE3AQ05086 875 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 DRP2Q13474 957 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 ME3Q16798 604 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 ANO5Q75V66 913 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 POF1BQ8WVV4 589 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 CD320Q9NPF0 282 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 AAASQ9NRG9 546 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 CLDND1Q9NY35 253 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-216ENST00000567023 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
COMMD4-216ENST00000567023 FAM50BQ9Y247 325 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 PCDHB12Q9Y5F1 795 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 A0A0U1RQF3 1178 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 EML1O00423 815 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 HOXA2O43364 376 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 DKC1O60832 514 aaKnown RBP eCLIP16■□□□□ 0.15
COMMD4-216ENST00000567023 MAFO75444 373 aaPredicted RBP16■□□□□ 0.15
COMMD4-216ENST00000567023 QARSP47897 775 aaKnown RBP16■□□□□ 0.15
COMMD4-216ENST00000567023 DNM2P50570 870 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 ADAM15Q13444 863 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 MTERF2Q49AM1 385 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 GJD3Q8N144 294 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 HAS1Q92839 578 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 GTF3C6Q969F1 213 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 PPP2R3CQ969Q6 453 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 CWH43Q9H720 699 aa16■□□□□ 0.15
COMMD4-216ENST00000567023 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
COMMD4-216ENST00000567023 TMEM150BA6NC51 233 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 CCNT1O60563 726 aaKnown RBP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 EOMESO95936 686 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 P4HBP07237 508 aaKnown RBP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 FGFR1P11362 822 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 IRS1P35568 1242 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 ZNF410Q86VK4 478 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 ECHDC2Q86YB7 292 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 NLRP7Q8WX94 980 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 KHSRPQ92945 711 aaKnown RBP eCLIP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 TNFRSF25Q93038 417 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 JPH2Q9BR39 696 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 TRAIPQ9BWF2 469 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 GCOM2Q9BZD3 368 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-216ENST00000567023 TMEM117Q9H0C3 514 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 EPHX3Q9H6B9 360 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 CHST12Q9NRB3 414 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 RNF19AQ9NV58 838 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 DACT1Q9NYF0 836 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 PRKAG3Q9UGI9 489 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 PPME1Q9Y570 386 aa15.99■□□□□ 0.15
COMMD4-216ENST00000567023 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 PI4K2BG5E9Z4 385 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 COL9A1P20849 921 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 IBSPP21815 317 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-216ENST00000567023 GTF2F1P35269 517 aaKnown RBP eCLIP15.98■□□□□ 0.154e-9■■■■■ 28.7
COMMD4-216ENST00000567023 PLCB3Q01970 1234 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 PDE12Q6L8Q7 609 aaKnown RBP15.98■□□□□ 0.15
COMMD4-216ENST00000567023 LRRC55Q6ZSA7 311 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 EP400NLQ6ZTU2 488 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
COMMD4-216ENST00000567023 C4orf19Q8IY42 314 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 SLFN12Q8IYM2 578 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 ZNF668Q96K58 619 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-216ENST00000567023 SH2D3AQ9BRG2 576 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 INO80BQ9C086 356 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-216ENST00000567023 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 SUCLA2Q9P2R7 463 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-216ENST00000567023 LZTS1Q9Y250 596 aa15.98■□□□□ 0.15
COMMD4-216ENST00000567023 A0A087WZ62 844 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 DTNBO60941 627 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 TBX10O75333 385 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 FGF18O76093 207 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 LARGE1O95461 756 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 LAG3P18627 525 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 KRT2P35908 639 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 NEK4P51957 841 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 SPIRE1Q08AE8 756 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 NR5A1Q13285 461 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 EPHA7Q15375 998 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 SMAD2Q15796 467 aaKnown RBP15.97■□□□□ 0.15
COMMD4-216ENST00000567023 SPOUT1Q5T280 376 aaKnown RBP15.97■□□□□ 0.15
COMMD4-216ENST00000567023 ADGRD2Q7Z7M1 963 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 EFHBQ8N7U6 833 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 COLGALT1Q8NBJ5 622 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 NSUN7Q8NE18 718 aaKnown RBP15.97■□□□□ 0.15
COMMD4-216ENST00000567023 RSPH1Q8WYR4 309 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 MSLNLQ96KJ4 702 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 SCLT1Q96NL6 688 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 FDXACB1Q9BRP7 624 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-216ENST00000567023 DHX33Q9H6R0 707 aaKnown RBP15.97■□□□□ 0.15
COMMD4-216ENST00000567023 WRAP73Q9P2S5 460 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms