RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 POMKQ9H5K3 350 aa17.57■□□□□ 0.4
PALB2-205ENST00000567003 FAM217BQ9NTX9 383 aaPredicted RBP17.57■□□□□ 0.4
PALB2-205ENST00000567003 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
PALB2-205ENST00000567003 PUF60Q9UHX1 559 aaKnown RBP17.57■□□□□ 0.4
PALB2-205ENST00000567003 MAFBQ9Y5Q3 323 aaPredicted RBP17.57■□□□□ 0.4
PALB2-205ENST00000567003 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 CA8P35219 290 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 KANK3Q6NY19 840 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 ECHDC2Q86YB7 292 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 LINC01465Q8N7H1 131 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 FEZF2Q8TBJ5 459 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 CRYGNQ8WXF5 182 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 RIPOR3Q96MK2 946 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 ADAMTS10Q9H324 1103 aa17.56■□□□□ 0.4
PALB2-205ENST00000567003 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
PALB2-205ENST00000567003 PTPRZ1P23471 2315 aaPredicted RBP17.56■□□□□ 0.4
PALB2-205ENST00000567003 KLF18A0A0U1RQI7 1052 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 NT5C1B-RDH14C9J2C7 533 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 BRD1O95696 1058 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 EXOSC10Q01780 885 aaKnown RBP17.55■□□□□ 0.4
PALB2-205ENST00000567003 EFCAB12Q6NXP0 572 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 ABI1Q8IZP0 508 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
PALB2-205ENST00000567003 HELQQ8TDG4 1101 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 SPG21Q9NZD8 308 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 NAP1L2Q9ULW6 460 aaPredicted RBP17.55■□□□□ 0.4
PALB2-205ENST00000567003 HCFC2Q9Y5Z7 792 aa17.55■□□□□ 0.4
PALB2-205ENST00000567003 RIF1Q5UIP0 2472 aaKnown RBP17.55■□□□□ 0.4
PALB2-205ENST00000567003 C2orf71A6NGG8 1288 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 hCG_1984214I3L0E3 225 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 HOXA2O43364 376 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 CLASP2O75122 1294 aaKnown RBP17.54■□□□□ 0.4
PALB2-205ENST00000567003 CSDE1O75534 798 aaKnown RBP17.54■□□□□ 0.4
PALB2-205ENST00000567003 ASGR2P07307 311 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 PSAPP07602 524 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 CYP3A4P08684 503 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 PPM1AP35813 382 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 METAP2P50579 478 aaKnown RBP eCLIP17.54■□□□□ 0.4
PALB2-205ENST00000567003 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 RARS2Q5T160 578 aaKnown RBP17.54■□□□□ 0.4
PALB2-205ENST00000567003 ZNF746Q6NUN9 644 aaPredicted RBP17.54■□□□□ 0.4
PALB2-205ENST00000567003 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 SLC39A11Q8N1S5 342 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 ZNF713Q8N859 430 aaPredicted RBP17.54■□□□□ 0.4
PALB2-205ENST00000567003 AUTS2Q8WXX7 1259 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 CASP10Q92851 521 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 MAP7D2Q96T17 732 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
PALB2-205ENST00000567003 ZNF862O60290 1169 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
PALB2-205ENST00000567003 HOXB8P17481 243 aaPredicted RBP17.53■□□□□ 0.4
PALB2-205ENST00000567003 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
PALB2-205ENST00000567003 KRT17Q04695 432 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 SMC1AQ14683 1233 aaKnown RBP17.53■□□□□ 0.4
PALB2-205ENST00000567003 UGCGQ16739 394 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 PRR16Q569H4 304 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 TMEM173Q86WV6 379 aaPredicted RBP17.53■□□□□ 0.4
PALB2-205ENST00000567003 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 TMEM105Q8N8V8 129 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 GLT8D2Q9H1C3 349 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 TBC1D22BQ9NU19 505 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 NR2E1Q9Y466 385 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 SAMM50Q9Y512 469 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
PALB2-205ENST00000567003 WDR87Q6ZQQ6 2873 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 CPA1P15085 419 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 EIF4BP23588 611 aaKnown RBP17.52■□□□□ 0.4
PALB2-205ENST00000567003 GPC3P51654 580 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 SETQ01105 290 aaPredicted RBP17.52■□□□□ 0.4
PALB2-205ENST00000567003 PRKCEQ02156 737 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 PFKFB3Q16875 520 aaPredicted RBP17.52■□□□□ 0.4
PALB2-205ENST00000567003 LONRF3Q496Y0 759 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 TPRNQ4KMQ1 711 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 ZNF598Q86UK7 904 aaKnown RBP17.52■□□□□ 0.4
PALB2-205ENST00000567003 TEX2Q8IWB9 1127 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 SMAP1Q8IYB5 467 aaPredicted RBP17.52■□□□□ 0.4
PALB2-205ENST00000567003 MRPL43Q8N983 215 aaKnown RBP17.52■□□□□ 0.4
PALB2-205ENST00000567003 GJA10Q969M2 543 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 SCLT1Q96NL6 688 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 ADAM7Q9H2U9 754 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 SORCS3Q9UPU3 1222 aa17.52■□□□□ 0.4
PALB2-205ENST00000567003 FAM186AA6NE01 2351 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 MAGEB2O15479 319 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 GALR2O43603 387 aaPredicted RBP17.51■□□□□ 0.39
PALB2-205ENST00000567003 CHMP2AO43633 222 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 OATP04181 439 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 DARSP14868 501 aaKnown RBP17.51■□□□□ 0.39
PALB2-205ENST00000567003 EPCAMP16422 314 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 BCAR1P56945 870 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 DRP2Q13474 957 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 MTMR3Q13615 1198 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 CES5AQ6NT32 575 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 FAM43BQ6ZT52 329 aaPredicted RBP17.51■□□□□ 0.39
PALB2-205ENST00000567003 DHX32Q7L7V1 743 aaKnown RBP17.51■□□□□ 0.39
PALB2-205ENST00000567003 ASCL5Q7RTU5 278 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 REXO1Q8N1G1 1221 aaKnown RBP17.51■□□□□ 0.39
PALB2-205ENST00000567003 LPPQ93052 612 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 LENG9Q96B70 501 aa17.51■□□□□ 0.39
PALB2-205ENST00000567003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms