RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 METAP2P50579 478 aaKnown RBP eCLIP19.16■□□□□ 0.66
CDH3-205ENST00000566808 POLGP54098 1239 aaPredicted RBP19.16■□□□□ 0.66
CDH3-205ENST00000566808 TBC1D8BQ0IIM8 1120 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 ZNF484Q5JVG2 852 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 PPFIBP1Q86W92 1011 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 MXRA8Q9BRK3 442 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 BAHCC1Q9P281 2608 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 SPDYE4A6NLX3 237 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 ZBTB42B2RXF5 422 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 STK25O00506 426 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 BACH1O14867 736 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 GPR32O75388 356 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 DDAH1O94760 285 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 C22orf31O95567 290 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 CTSAP10619 480 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 ZSCAN20P17040 1043 aaPredicted RBP19.15■□□□□ 0.66
CDH3-205ENST00000566808 BCAR1P56945 870 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 ITGB3BPQ13352 177 aaPredicted RBP19.15■□□□□ 0.66
CDH3-205ENST00000566808 HDAC1Q13547 482 aaPredicted RBP19.15■□□□□ 0.66
CDH3-205ENST00000566808 NONOQ15233 471 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDH3-205ENST00000566808 RALYLQ86SE5 291 aaKnown RBP19.15■□□□□ 0.66
CDH3-205ENST00000566808 RNF169Q8NCN4 708 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 AUTS2Q8WXX7 1259 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 RIN2Q8WYP3 895 aaPredicted RBP19.15■□□□□ 0.66
CDH3-205ENST00000566808 RSPH1Q8WYR4 309 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 LZTS2Q9BRK4 669 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 WDR81Q562E7 1941 aa19.15■□□□□ 0.66
CDH3-205ENST00000566808 KRBA1A5PL33 1030 aa19.14■□□□□ 0.65
CDH3-205ENST00000566808 NARSO43776 548 aaKnown RBP19.14■□□□□ 0.65
CDH3-205ENST00000566808 VTNP04004 478 aa19.14■□□□□ 0.65
CDH3-205ENST00000566808 RSPO4Q2I0M5 234 aaPredicted RBP19.14■□□□□ 0.65
CDH3-205ENST00000566808 C15orf39Q6ZRI6 1047 aa19.14■□□□□ 0.65
CDH3-205ENST00000566808 CCDC60Q8IWA6 550 aaPredicted RBP19.14■□□□□ 0.65
CDH3-205ENST00000566808 TBC1D17Q9HA65 648 aa19.14■□□□□ 0.65
CDH3-205ENST00000566808 NT5C1B-RDH14C9J2C7 533 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 CFHP08603 1231 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 SP9P0CG40 484 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 LETM2Q2VYF4 491 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 PDXDC2PQ6P474 469 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 DDX53Q86TM3 631 aaKnown RBP19.13■□□□□ 0.65
CDH3-205ENST00000566808 ZNF654Q8IZM8 581 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 FEZF2Q8TBJ5 459 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 HELQQ8TDG4 1101 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 OSBPL3Q9H4L5 887 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 AGO4Q9HCK5 861 aaKnown RBP19.13■□□□□ 0.65
CDH3-205ENST00000566808 U3KPZ7 1027 aaPredicted RBP19.13■□□□□ 0.65
CDH3-205ENST00000566808 PATJQ8NI35 1801 aa19.13■□□□□ 0.65
CDH3-205ENST00000566808 A0A0U1RQF3 1178 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 ZC3H11AO75152 810 aaKnown RBP eCLIP19.12■□□□□ 0.65
CDH3-205ENST00000566808 CCNE2O96020 404 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 SDHBP21912 280 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 GNAQP50148 359 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 CEP55Q53EZ4 464 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 ABHD15Q6UXT9 468 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 ZNF598Q86UK7 904 aaKnown RBP19.12■□□□□ 0.65
CDH3-205ENST00000566808 TMEM173Q86WV6 379 aaPredicted RBP19.12■□□□□ 0.65
CDH3-205ENST00000566808 ZNF710Q8N1W2 664 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 METTL13Q8N6R0 699 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 ZNF302Q9NR11 478 aa19.12■□□□□ 0.65
CDH3-205ENST00000566808 SRFP11831 508 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 PTPN14Q15678 1187 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 PHLDB3Q6NSJ2 640 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 DCLK2Q8N568 766 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 SUMF1Q8NBK3 374 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 NCOA7Q8NI08 942 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 IGSF21Q96ID5 467 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 MAP7D2Q96T17 732 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 MYL10Q9BUA6 226 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 IL25Q9H293 177 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 DACT1Q9NYF0 836 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 CA14Q9ULX7 337 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 ATRXP46100 2492 aa19.11■□□□□ 0.65
CDH3-205ENST00000566808 FAM208BQ5VWN6 2430 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 PLEKHA8P1O95397 391 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 CYP21A2P08686 494 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 EIF4BP23588 611 aaKnown RBP19.1■□□□□ 0.65
CDH3-205ENST00000566808 SPECC1Q5M775 1068 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 C1orf210Q8IVY1 113 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 CKAP2LQ8IYA6 745 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 BBXQ8WY36 941 aaPredicted RBP19.1■□□□□ 0.65
CDH3-205ENST00000566808 EMILIN2Q9BXX0 1053 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 DLGAP2Q9P1A6 1054 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 STK39Q9UEW8 545 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 CEP131Q9UPN4 1083 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 AKT3Q9Y243 479 aa19.1■□□□□ 0.65
CDH3-205ENST00000566808 KINO60870 393 aaKnown RBP19.09■□□□□ 0.65
CDH3-205ENST00000566808 N4BP1O75113 896 aaKnown RBP19.09■□□□□ 0.65
CDH3-205ENST00000566808 DCNP07585 359 aaKnown RBP19.09■□□□□ 0.65
CDH3-205ENST00000566808 CLCN3P51790 818 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 CLCN4P51793 760 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 NLRP11P59045 1033 aaKnown RBP19.09■□□□□ 0.65
CDH3-205ENST00000566808 MIS18BP1Q6P0N0 1132 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 TEX2Q8IWB9 1127 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 PLEKHM2Q8IWE5 1019 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 SRBD1Q8N5C6 995 aaKnown RBP19.09■□□□□ 0.65
CDH3-205ENST00000566808 CMASQ8NFW8 434 aaPredicted RBP19.09■□□□□ 0.65
CDH3-205ENST00000566808 IGDCC4Q8TDY8 1250 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms