RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LRIT3Q3SXY7 679 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 HABP4Q5JVS0 413 aaKnown RBP29.07■■■□□ 2.24
NME3-209ENST00000566600 PADI6Q6TGC4 694 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 ZNF410Q86VK4 478 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 RHPN2Q8IUC4 686 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 RASSF8Q8NHQ8 419 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 TMEM143Q96AN5 459 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 CCSER1Q9C0I3 900 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 TRIOBPQ9H2D6 2365 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 BHMT2Q9H2M3 363 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 ADAMTS10Q9H324 1103 aa29.07■■■□□ 2.24
NME3-209ENST00000566600 USO1O60763 962 aaKnown RBP29.06■■■□□ 2.24
NME3-209ENST00000566600 DDIT3P35638 169 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 GRB10Q13322 594 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 PRPF31Q8WWY3 499 aaKnown RBP29.06■■■□□ 2.24
NME3-209ENST00000566600 NLRP7Q8WX94 980 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 PNMA5Q96PV4 448 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 PPP1R16BQ96T49 567 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 OSMRQ99650 979 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 OSBPL7Q9BZF2 842 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 CDHR5Q9HBB8 845 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 XPNPEP1Q9NQW7 623 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 BMP2KQ9NSY1 1161 aaPredicted RBP29.06■■■□□ 2.24
NME3-209ENST00000566600 COL4A3BPQ9Y5P4 624 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 SLC4A7Q9Y6M7 1214 aa29.06■■■□□ 2.24
NME3-209ENST00000566600 E9PMD0 336 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 RPS6KA5O75582 802 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 KCNJ6P48051 423 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 KRT85P78386 507 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 PAK2Q13177 524 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 MXD4Q14582 209 aaPredicted RBP29.05■■■□□ 2.24
NME3-209ENST00000566600 TMEM119Q4V9L6 283 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 CLIC6Q96NY7 704 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 GCOM2Q9BZD3 368 aaPredicted RBP29.05■■■□□ 2.24
NME3-209ENST00000566600 CCDC39Q9UFE4 941 aa29.05■■■□□ 2.24
NME3-209ENST00000566600 CYP11B2P19099 503 aa29.04■■■□□ 2.24
NME3-209ENST00000566600 EIF4BP23588 611 aaKnown RBP29.04■■■□□ 2.24
NME3-209ENST00000566600 FTHL17Q9BXU8 183 aa29.04■■■□□ 2.24
NME3-209ENST00000566600 INO80BQ9C086 356 aaPredicted RBP29.04■■■□□ 2.24
NME3-209ENST00000566600 AGO3Q9H9G7 860 aaKnown RBP29.04■■■□□ 2.24
NME3-209ENST00000566600 CXXC1Q9P0U4 656 aaPredicted RBP29.04■■■□□ 2.24
NME3-209ENST00000566600 PADI3Q9ULW8 664 aa29.04■■■□□ 2.24
NME3-209ENST00000566600 GPR182O15218 404 aa29.03■■■□□ 2.24
NME3-209ENST00000566600 CUTAO60888 179 aa29.03■■■□□ 2.24
NME3-209ENST00000566600 CD52P31358 61 aa29.03■■■□□ 2.24
NME3-209ENST00000566600 LAMTOR4Q0VGL1 99 aa29.03■■■□□ 2.24
NME3-209ENST00000566600 SYMPKQ92797 1274 aaKnown RBP29.03■■■□□ 2.24
NME3-209ENST00000566600 EPSTI1Q96J88 318 aa29.03■■■□□ 2.24
NME3-209ENST00000566600 RCOR1Q9UKL0 485 aa29.03■■■□□ 2.24
NME3-209ENST00000566600 NOC2LQ9Y3T9 749 aaKnown RBP29.03■■■□□ 2.24
NME3-209ENST00000566600 DARSP14868 501 aaKnown RBP29.02■■■□□ 2.24
NME3-209ENST00000566600 NCLP19338 710 aaKnown RBP29.02■■■□□ 2.24
NME3-209ENST00000566600 ARL2P36404 184 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 TFDP1Q14186 410 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 KARSQ15046 597 aaKnown RBP29.02■■■□□ 2.24
NME3-209ENST00000566600 SPECC1Q5M775 1068 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 KCNK18Q7Z418 384 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 PHOSPHO2Q8TCD6 241 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 TMEM40Q8WWA1 233 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 NLRP4Q96MN2 994 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 SLC9A7Q96T83 725 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 PLIN2Q99541 437 aa29.02■■■□□ 2.24
NME3-209ENST00000566600 CIZ1Q9ULV3 898 aaPredicted RBP29.02■■■□□ 2.24
NME3-209ENST00000566600 A0A087WZ62 844 aa29.01■■■□□ 2.23
NME3-209ENST00000566600 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.01■■■□□ 2.23
NME3-209ENST00000566600 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.01■■■□□ 2.23
NME3-209ENST00000566600 ME1P48163 572 aa29.01■■■□□ 2.23
NME3-209ENST00000566600 WDR5P61964 334 aaKnown RBP29.01■■■□□ 2.23
NME3-209ENST00000566600 TCTN1Q2MV58 587 aa29.01■■■□□ 2.23
NME3-209ENST00000566600 FDXACB1Q9BRP7 624 aaPredicted RBP29.01■■■□□ 2.23
NME3-209ENST00000566600 POLR3FQ9H1D9 316 aaPredicted RBP29.01■■■□□ 2.23
NME3-209ENST00000566600 SRGAP2CP0DJJ0 459 aa29■■■□□ 2.23
NME3-209ENST00000566600 PLCG1P19174 1290 aa29■■■□□ 2.23
NME3-209ENST00000566600 NFX1Q12986 1120 aaKnown RBP29■■■□□ 2.23
NME3-209ENST00000566600 FAM102BQ5T8I3 360 aa29■■■□□ 2.23
NME3-209ENST00000566600 KSR1Q8IVT5 923 aa29■■■□□ 2.23
NME3-209ENST00000566600 SYT2Q8N9I0 419 aaPredicted RBP29■■■□□ 2.23
NME3-209ENST00000566600 ZNF668Q96K58 619 aaPredicted RBP29■■■□□ 2.23
NME3-209ENST00000566600 ERVK-5Q9HDB9 667 aa29■■■□□ 2.23
NME3-209ENST00000566600 KCND2Q9NZV8 630 aa29■■■□□ 2.23
NME3-209ENST00000566600 ST3GAL5Q9UNP4 418 aa29■■■□□ 2.23
NME3-209ENST00000566600 AMHP03971 560 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 PLA2G4BP0C869 781 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 ATP2A2P16615 1042 aaKnown RBP28.99■■■□□ 2.23
NME3-209ENST00000566600 PHKA2P46019 1235 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 POU5F1BQ06416 359 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 USP49Q70CQ1 688 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 MAEAQ7L5Y9 396 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 FAM228AQ86W67 206 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 KIFAP3Q92845 792 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 TIPINQ9BVW5 301 aa28.99■■■□□ 2.23
NME3-209ENST00000566600 SCAND2PQ9GZW5 306 aaPredicted RBP28.99■■■□□ 2.23
NME3-209ENST00000566600 SSBP05455 408 aaKnown RBP eCLIP28.98■■■□□ 2.23
NME3-209ENST00000566600 SFPQP23246 707 aaKnown RBP eCLIP28.98■■■□□ 2.23
NME3-209ENST00000566600 SMAD3P84022 425 aaKnown RBP28.98■■■□□ 2.23
NME3-209ENST00000566600 RINT1Q6NUQ1 792 aa28.98■■■□□ 2.23
NME3-209ENST00000566600 SRGAP1Q7Z6B7 1085 aa28.98■■■□□ 2.23
NME3-209ENST00000566600 RNF149Q8NC42 400 aa28.98■■■□□ 2.23
NME3-209ENST00000566600 SPATA32Q96LK8 384 aa28.98■■■□□ 2.23
NME3-209ENST00000566600 STK17AQ9UEE5 414 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms