RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 MRPL43Q8N983 215 aaKnown RBP15.18■□□□□ 0.02
COMMD4-214ENST00000566230 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-214ENST00000566230 ADAMTS10Q9H324 1103 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 SMOC2Q9H3U7 446 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 POMKQ9H5K3 350 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 SPG21Q9NZD8 308 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 HCFC2Q9Y5Z7 792 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 DMDP11532 3685 aa15.18■□□□□ 0.02
COMMD4-214ENST00000566230 C2orf71A6NGG8 1288 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 PROB1E7EW31 1015 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 IPO5O00410 1097 aaKnown RBP15.17■□□□□ 0.02
COMMD4-214ENST00000566230 HOXA2O43364 376 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 CLASP2O75122 1294 aaKnown RBP15.17■□□□□ 0.02
COMMD4-214ENST00000566230 CYP3A4P08684 503 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 PPM1AP35813 382 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 CLCN3P51790 818 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 NUBP1P53384 320 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 NLRP11P59045 1033 aaKnown RBP15.17■□□□□ 0.02
COMMD4-214ENST00000566230 KRT17Q04695 432 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 JAKMIP3Q5VZ66 844 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 DHX32Q7L7V1 743 aaKnown RBP15.17■□□□□ 0.02
COMMD4-214ENST00000566230 CKAP2LQ8IYA6 745 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 SLC39A11Q8N1S5 342 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 LRRC43Q8N309 656 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 LINC01465Q8N7H1 131 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 TMEM105Q8N8V8 129 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 CASP10Q92851 521 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 ADAM7Q9H2U9 754 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 FAM217BQ9NTX9 383 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-214ENST00000566230 SORCS3Q9UPU3 1222 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 NR2E1Q9Y466 385 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF292O60281 2723 aa15.17■□□□□ 0.02
COMMD4-214ENST00000566230 WEE2P0C1S8 567 aa15.16■□□□□ 0.02
COMMD4-214ENST00000566230 TPRNQ4KMQ1 711 aa15.16■□□□□ 0.02
COMMD4-214ENST00000566230 SYNE3Q6ZMZ3 975 aa15.16■□□□□ 0.02
COMMD4-214ENST00000566230 ASCL5Q7RTU5 278 aa15.16■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF598Q86UK7 904 aaKnown RBP15.16■□□□□ 0.02
COMMD4-214ENST00000566230 UBALD2Q8IYN6 164 aa15.16■□□□□ 0.02
COMMD4-214ENST00000566230 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-214ENST00000566230 RBM28Q9NW13 759 aaKnown RBP15.16■□□□□ 0.02
COMMD4-214ENST00000566230 hCG_1984214I3L0E3 225 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 EIF4BP23588 611 aaKnown RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 EXOSC10Q01780 885 aaKnown RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 ITIH3Q06033 890 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 MTMR3Q13615 1198 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 SMC1AQ14683 1233 aaKnown RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 RTN1Q16799 776 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 CES5AQ6NT32 575 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF746Q6NUN9 644 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 KANK3Q6NY19 840 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 ABI1Q8IZP0 508 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 LRRC71Q8N4P6 559 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 C12orf76Q8N812 135 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF713Q8N859 430 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-214ENST00000566230 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 NECTIN4Q96NY8 510 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 ZNF577Q9BSK1 485 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 GLT8D2Q9H1C3 349 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 TBC1D22BQ9NU19 505 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 GABBR1Q9UBS5 961 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 PCDHA10Q9Y5I2 948 aa15.15■□□□□ 0.02
COMMD4-214ENST00000566230 DENND4AQ7Z401 1863 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 A0A0U1RQF3 1178 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 NT5C1B-RDH14C9J2C7 533 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 MAGEB2O15479 319 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 ZBTB43O43298 467 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 ZNF862O60290 1169 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 ASGR2P07307 311 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 PSAPP07602 524 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 PSMA5P28066 241 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 CDC27P30260 824 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 FEZF2Q8TBJ5 459 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 AKT3Q9Y243 479 aa15.14■□□□□ 0.01
COMMD4-214ENST00000566230 PRR23AA6NEV1 266 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 CXCL14O95715 111 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 EOMESO95936 686 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 DARSP14868 501 aaKnown RBP15.13■□□□□ 0.01
COMMD4-214ENST00000566230 FGFR4P22455 802 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 NBL1P41271 181 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 MTHFRP42898 656 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.01
COMMD4-214ENST00000566230 BCAR1P56945 870 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
COMMD4-214ENST00000566230 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-214ENST00000566230 ZDHHC14Q8IZN3 488 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 AUTS2Q8WXX7 1259 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 CEP131Q9UPN4 1083 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 SNX14Q9Y5W7 946 aa15.13■□□□□ 0.01
COMMD4-214ENST00000566230 EP300Q09472 2414 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms