RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PTCRAQ6ISU1 281 aaPredicted RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 ANO5Q75V66 913 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 NLRX1Q86UT6 975 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 DAW1Q8N136 415 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 MB21D1Q8N884 522 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 TC2NQ8N9U0 490 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 CNOT6LQ96LI5 555 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 FGD4Q96M96 766 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 KCTD10Q9H3F6 313 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 GABBR1Q9UBS5 961 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 RASSF10A6NK89 507 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 CLIC2O15247 247 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 HIP1RO75146 1068 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 EIF3JO75822 258 aaKnown RBP6.87□□□□□ -1.31
CHD9-217ENST00000565832 GCNT3O95395 438 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 SFPQP23246 707 aaKnown RBP eCLIP6.87□□□□□ -1.314e-6■■■□□ 18.1
CHD9-217ENST00000565832 RARRES1P49788 294 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 ERVK-9P63128 1117 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 ERVK-24P63145 666 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 TJAP1Q5JTD0 557 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 LRRC55Q6ZSA7 311 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 CCDC60Q8IWA6 550 aaPredicted RBP6.87□□□□□ -1.31
CHD9-217ENST00000565832 KCTD17Q8N5Z5 321 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 SAMD3Q8N6K7 520 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 FAM133AQ8N9E0 248 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 ARMC2Q8NEN0 867 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 ZNF507Q8TCN5 953 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 SMCR8Q8TEV9 937 aaPredicted RBP6.87□□□□□ -1.31
CHD9-217ENST00000565832 FIZ1Q96SL8 496 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 THAP9Q9H5L6 903 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 PDGFCQ9NRA1 345 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 PNMA2Q9UL42 364 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 PCDHA10Q9Y5I2 948 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 MYH9P35579 1960 aaKnown RBP6.87□□□□□ -1.31
CHD9-217ENST00000565832 LOC285556D6RIA3 1793 aa6.87□□□□□ -1.31
CHD9-217ENST00000565832 BICDL2A1A5D9 508 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ARHGEF35A5YM69 484 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 TISP43B9A030 160 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 USO1O60763 962 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 TBCAO75347 108 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 ARIH2O95376 493 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 GYPCP04921 128 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 TPM3P06753 285 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ATP4AP20648 1035 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 MTIF2P46199 727 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 ACTR2P61160 394 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 APBA1Q02410 837 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 PTK2Q05397 1052 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 MAPK7Q13164 816 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ADAM9Q13443 819 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 MTF1Q14872 753 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 FILIP1LQ4L180 1135 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ZCWPW2Q504Y3 356 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 COBLL1Q53SF7 1204 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ODR4Q5SWX8 454 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 EPM2AIP1Q7L775 607 aaPredicted RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 TMEM139Q8IV31 216 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 C2orf69Q8N8R5 385 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 GPRASP2Q96D09 838 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 CTAGE1Q96RT6 745 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 NOC4LQ9BVI4 516 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 UNC93B1Q9H1C4 597 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 JPH1Q9HDC5 661 aaPredicted RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 SLC9A2Q9UBY0 812 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 LAMA2P24043 3122 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 A0A0U1RQJ8 604 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 WDR64B1ANS9 1081 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 TGFB1I1O43294 461 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 FAM13AO94988 1023 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 STBD1O95210 358 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 EEF1GP26641 437 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 CASP4P49662 377 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 HUNKP57058 714 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 GSDMDP57764 484 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 PSMC5P62195 406 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 TBC1D8BQ0IIM8 1120 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 KNOP1Q1ED39 458 aaKnown RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 XKR9Q5GH70 373 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 GJC2Q5T442 439 aaPredicted RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 SPRYD7Q5W111 196 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 E4F1Q66K89 784 aaPredicted RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 ABHD15Q6UXT9 468 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ZNF720Q7Z2F6 126 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 DNERQ8NFT8 737 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 ATRIPQ8WXE1 791 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 COPS5Q92905 334 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 IWS1Q96ST2 819 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 MMP19Q99542 508 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 KIFC3Q9BVG8 833 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 TMX1Q9H3N1 280 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 PARVGQ9HBI0 331 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 AGPAT5Q9NUQ2 364 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 MAGEC2Q9UBF1 373 aaPredicted RBP6.86□□□□□ -1.31
CHD9-217ENST00000565832 TCEAL9Q9UHQ7 104 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
CHD9-217ENST00000565832 COL4A3BPQ9Y5P4 624 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms