RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PNMA8BQ9ULN7 279 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 PCDHGB4Q9UN71 923 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 MAPRE3Q9UPY8 281 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CNPY2Q9Y2B0 182 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PCDHGB2Q9Y5G2 931 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SNCAIPQ9Y6H5 919 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 KIF24Q5T7B8 1368 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 FRMD3A2A2Y4 597 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 CCDC69A6NI79 296 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 CASQ2O14958 399 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 NCAM2O15394 837 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ABLIM3O94929 683 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 FBXO21O94952 628 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MYCP01106 439 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 PF4P02776 101 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ASGR2P07307 311 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 HMOX1P09601 288 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 RHOXF2BP0C7M4 288 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 HSD3B1P14060 373 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PHKG2P15735 406 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ATXN1P54253 815 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 FCGRTP55899 365 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ICA1Q05084 483 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PTK2Q05397 1052 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PDE4BQ07343 736 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PPFIA1Q13136 1202 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PPP1R7Q15435 360 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 INAQ16352 499 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MMEL1Q495T6 779 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 FILIP1LQ4L180 1135 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SETMARQ53H47 684 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 MAP3K21Q5TCX8 1036 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PCNX4Q63HM2 1172 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SLC22A25Q6T423 547 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 NFXL1Q6ZNB6 911 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 EPHX4Q8IUS5 362 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 KLHL23Q8NBE8 558 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 FAM156AQ8NDB6 213 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ST13P5Q8NFI4 369 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 NEK11Q8NG66 645 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 DIS3LQ8TF46 1054 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 KIAA1191Q96A73 305 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 CCDC74AQ96AQ1 378 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 RRP36Q96EU6 259 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 ZNF845Q96IR2 970 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 FAM129BQ96TA1 746 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 LBHD1Q9BQE6 289 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 RHOXF2Q9BQY4 288 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ARHGAP9Q9BRR9 750 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 BCO2Q9BYV7 579 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PUS7LQ9H0K6 701 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 THAP9Q9H5L6 903 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PPP4R2Q9NY27 417 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ORC3Q9UBD5 711 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 PAXBP1Q9Y5B6 917 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PARP3Q9Y6F1 533 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 TTC21AQ8NDW8 1320 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 KIF16BQ96L93 1317 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MAST2Q6P0Q8 1798 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 A6NLC8 198 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 A8MV72 311 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 FAM25EA8MYX2 175 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PPFIA2O75334 1257 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MICAL2O94851 1124 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 BAG2O95816 211 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 LTFP02788 710 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SDSP20132 328 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MAPK3P27361 379 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 RXRGP48443 463 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 TNFAIP2Q03169 654 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PTPN12Q05209 780 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 KIF5AQ12840 1032 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SLC14A2Q15849 920 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SPATA1Q5VX52 437 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 FAM205BPQ63HN1 556 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 POMZP3Q6PJE2 187 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 GALNT7Q86SF2 657 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 TMEM57Q8N5G2 664 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 TEX9Q8N6V9 391 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 CEP70Q8NHQ1 597 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PIGSQ96S52 555 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 GAS2L1Q99501 681 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 ADPGKQ9BRR6 497 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MXD3Q9BW11 206 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ADAM19Q9H013 955 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 CCDC68Q9H2F9 335 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 EDARQ9UNE0 448 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 CASP8AP2Q9UKL3 1982 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 NUDT19A8MXV4 375 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 M0R2C6 588 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 NDC80O14777 642 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 DDX3YO15523 660 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 GPR39O43194 453 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 DRG2P55039 364 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 CDC16Q13042 620 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SNX1Q13596 522 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SURF1Q15526 300 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 COX20Q5RI15 118 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 C1orf53Q5VUE5 145 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 YOD1Q5VVQ6 348 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms