RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 TMEM62Q0P6H9 643 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 TRAF1Q13077 416 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 MARCH8Q5T0T0 291 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 KCNT2Q6UVM3 1135 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 CABP7Q86V35 215 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-215ENST00000565559 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 JMJD4Q9H9V9 463 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 RGS18Q9NS28 235 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 CA14Q9ULX7 337 aa12.81□□□□□ -0.36
CAPN3-215ENST00000565559 KRBA1A5PL33 1030 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 HOXA2O43364 376 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 NARSO43776 548 aaKnown RBP12.8□□□□□ -0.36
CAPN3-215ENST00000565559 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
CAPN3-215ENST00000565559 KRT76Q01546 638 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ALX1Q15699 326 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ZNF528Q3MIS6 628 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 PPM1JQ5JR12 505 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 PHLDB3Q6NSJ2 640 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ABI1Q8IZP0 508 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 LRRC43Q8N309 656 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ATRIPQ8WXE1 791 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ESR2Q92731 530 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ADAM2Q99965 735 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 SENP7Q9BQF6 1050 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 TMEM117Q9H0C3 514 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 SFXN1Q9H9B4 322 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 TMEM161AQ9NX61 479 aa12.8□□□□□ -0.36
CAPN3-215ENST00000565559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-215ENST00000565559 RPS6KA5O75582 802 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 FGFR1P11362 822 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 COL9A3Q14050 684 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-215ENST00000565559 GIT2Q14161 759 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 NME8Q8N427 588 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 SEPT1Q8WYJ6 367 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 SMARCAD1Q9H4L7 1026 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-215ENST00000565559 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 PCDHGA2Q9Y5H1 932 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 KDM3AQ9Y4C1 1321 aa12.79□□□□□ -0.36
CAPN3-215ENST00000565559 C9IYK1 514 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 ZBTB5O15062 677 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 GPR182O15218 404 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 CXCL14O95715 111 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 NEFLP07196 543 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 SRFP11831 508 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 PBX3P40426 434 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 MRPS9P82933 396 aaKnown RBP12.78□□□□□ -0.36
CAPN3-215ENST00000565559 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 KANK3Q6NY19 840 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 IQCA1Q86XH1 822 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 ELAC1Q9H777 363 aaKnown RBP12.78□□□□□ -0.36
CAPN3-215ENST00000565559 ARHGEF3Q9NR81 526 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 SMG5Q9UPR3 1016 aaKnown RBP12.78□□□□□ -0.36
CAPN3-215ENST00000565559 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 TELO2Q9Y4R8 837 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 PCDHA2Q9Y5H9 948 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
CAPN3-215ENST00000565559 FASNP49327 2511 aaKnown RBP12.78□□□□□ -0.36
CAPN3-215ENST00000565559 LAMTOR5O43504 91 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 MGEA5O60502 916 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 FGAP02671 866 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 INSRRP14616 1297 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 EPCAMP16422 314 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 NT5C2P49902 561 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 NUCB1Q02818 461 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 LETM2Q2VYF4 491 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 LAPTM4BQ86VI4 370 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 PPFIBP1Q86W92 1011 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 STAMQ92783 540 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 WNT2BQ93097 391 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 NXPE3Q969Y0 559 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 ZBTB10Q96DT7 871 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
CAPN3-215ENST00000565559 SPATA6Q9NWH7 488 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-215ENST00000565559 FBXO4Q9UKT5 387 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 KAT6AQ92794 2004 aa12.77□□□□□ -0.37
CAPN3-215ENST00000565559 SMIM35A0A1B0GVV1 85 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-215ENST00000565559 HAND2P61296 217 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 LRRC55Q6ZSA7 311 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 SLC39A11Q8N1S5 342 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 PJA1Q8NG27 643 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms