RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PLCB3Q01970 1234 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 PRKCEQ02156 737 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 DRP2Q13474 957 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 DUSP6Q16828 381 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 Q4G0T1 1027 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 WDR81Q562E7 1941 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 TMEM184AQ6ZMB5 413 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 HFE2Q6ZVN8 426 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF598Q86UK7 904 aaKnown RBP9.69□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF710Q8N1W2 664 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 CCDC148Q8NFR7 591 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 PPP2R3CQ969Q6 453 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF668Q96K58 619 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-213ENST00000565173 MBOAT7Q96N66 472 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 POP1Q99575 1024 aaKnown RBP9.69□□□□□ -0.86
CAPN3-213ENST00000565173 NIFKQ9BYG3 293 aaKnown RBP9.69□□□□□ -0.86
CAPN3-213ENST00000565173 TMEM117Q9H0C3 514 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 TLR9Q9NR96 1032 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 AAASQ9NRG9 546 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 PCDHA4Q9UN74 947 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 LZTS1Q9Y250 596 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 MUC6Q6W4X9 2439 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 IGKV6-21A0A0C4DH24 114 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 TMEM150BA6NC51 233 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 CHMP2AO43633 222 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 GAS7O60861 476 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 CSDE1O75534 798 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 REC8O95072 547 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 DARSP14868 501 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 ATF7P17544 494 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 FGFR4P22455 802 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 TMOD1P28289 359 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 SFNP31947 248 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 PBX3P40426 434 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 NLRP5P59047 1200 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 CBX2Q14781 532 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 CLLU1OSQ5K130 101 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 SPOUT1Q5T280 376 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 LRCH2Q5VUJ6 765 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 KCNT2Q6UVM3 1135 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 ECHDC2Q86YB7 292 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 THNSL1Q8IYQ7 743 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 ETNPPLQ8TBG4 499 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 SUSD6Q92537 303 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF274Q96GC6 653 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 AIFM3Q96NN9 605 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 S1PR5Q9H228 398 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 TCEAL9Q9UHQ7 104 aa9.68□□□□□ -0.86
CAPN3-213ENST00000565173 USP15Q9Y4E8 981 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-213ENST00000565173 DMDP11532 3685 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 MYO15AQ9UKN7 3530 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 HIDE1A8MVS5 230 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 TDP2O95551 362 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-213ENST00000565173 LAG3P18627 525 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 JAK3P52333 1124 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 SSRP1Q08945 709 aaKnown RBP9.67□□□□□ -0.86
CAPN3-213ENST00000565173 TBC1D8BQ0IIM8 1120 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 BLIDQ8IZY5 108 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 DAGLBQ8NCG7 672 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 RDM1Q8NG50 284 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 EDAQ92838 391 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 MAP7D2Q96T17 732 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 CDCA3Q99618 268 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-213ENST00000565173 SH2D3AQ9BRG2 576 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 TRAIPQ9BWF2 469 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 TEKT3Q9BXF9 490 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 TM6SF1Q9BZW5 370 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 CYP46A1Q9Y6A2 500 aa9.67□□□□□ -0.86
CAPN3-213ENST00000565173 EML1O00423 815 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 HOXA2O43364 376 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 MAFO75444 373 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-213ENST00000565173 DEXIO95424 95 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 EOMESO95936 686 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 XKR3Q5GH77 459 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 GALNT17Q6IS24 598 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 ANKRD54Q6NXT1 300 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 SYCE2Q6PIF2 218 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 MOXD1Q6UVY6 613 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 ANO5Q75V66 913 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 MIER3Q7Z3K6 550 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 SLC39A11Q8N1S5 342 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 LRRC43Q8N309 656 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 MRPL43Q8N983 215 aaKnown RBP9.66□□□□□ -0.86
CAPN3-213ENST00000565173 FBXL18Q96ME1 805 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 ZNF558Q96NG5 402 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 TCF25Q9BQ70 676 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 PHF7Q9BWX1 381 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-213ENST00000565173 C22orf23Q9BZE7 217 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
CAPN3-213ENST00000565173 NGRNQ9NPE2 291 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms