RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ADAM2Q99965 735 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 C1orf112Q9NSG2 853 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 SUCLA2Q9P2R7 463 aaPredicted RBP20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 H3BQV1 296 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 OR52Z1P0C646 297 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 POU3F3P20264 500 aaPredicted RBP20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 RFC5P40937 340 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 TECP42680 631 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 GRB10Q13322 594 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 XKR9Q5GH70 373 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 RHPN2Q8IUC4 686 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 FBXO22Q8NEZ5 403 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 HSD17B14Q9BPX1 270 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 C17orf80Q9BSJ5 609 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 GCOM2Q9BZD3 368 aaPredicted RBP20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 RGS18Q9NS28 235 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 PCDHB7Q9Y5E2 793 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 NLRC5Q86WI3 1866 aa20.51■□□□□ 0.87
SYNGR3-204ENST00000564642 POTEMA6NI47 508 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 MGEA5O60502 916 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 DGKIO75912 1065 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 DARSP14868 501 aaKnown RBP20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 ZSCAN20P17040 1043 aaPredicted RBP20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 SARSP49591 514 aaKnown RBP20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 BTG3Q14201 252 aaPredicted RBP20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 SLC24A5Q71RS6 500 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 ZNF579Q8NAF0 562 aaKnown RBP20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 GDPD5Q8WTR4 605 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 MTCH2Q9Y6C9 303 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 CDH23Q9H251 3354 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 ADGRA3Q8IWK6 1321 aa20.5■□□□□ 0.87
SYNGR3-204ENST00000564642 CHD9Q3L8U1 2897 aa20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 COL4A4P53420 1690 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 ARID2Q68CP9 1835 aa20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 ZBTB39O15060 712 aa20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 ZNF689Q96CS4 500 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 DHX33Q9H6R0 707 aaKnown RBP20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 RALGAPA2Q2PPJ7 1873 aa20.49■□□□□ 0.87
SYNGR3-204ENST00000564642 COL4A6Q14031 1691 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 A0A087WZ62 844 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 GAS2O43903 313 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 LYPLA2O95372 231 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 NBR1Q14596 966 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 EPC2Q52LR7 807 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 ZNF410Q86VK4 478 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 CRIPAKQ8N1N5 446 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 ERMNQ8TAM6 284 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 TCP11Q8WWU5 503 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 PSPC1Q8WXF1 523 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 NLRP4Q96MN2 994 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 MTRQ99707 1265 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 FDXACB1Q9BRP7 624 aaPredicted RBP20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 BMP2KQ9NSY1 1161 aaPredicted RBP20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 LMCD1Q9NZU5 365 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 RWDD3Q9Y3V2 267 aa20.48■□□□□ 0.87
SYNGR3-204ENST00000564642 C9IYK1 514 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 LPXNO60711 386 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 FGFR4P22455 802 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 DSC3Q14574 896 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 EMC2Q15006 297 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 LARP1BQ659C4 914 aaKnown RBP20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 KSR1Q8IVT5 923 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 CMTR2Q8IYT2 770 aaKnown RBP20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 TMEM143Q96AN5 459 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 RC3H2Q9HBD1 1191 aaKnown RBP20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 TUFT1Q9NNX1 390 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 COL4A3BPQ9Y5P4 624 aa20.47■□□□□ 0.87
SYNGR3-204ENST00000564642 ASAP2O43150 1006 aa20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 CSDE1O75534 798 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 SFPQP23246 707 aaKnown RBP eCLIP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 TOB1P50616 345 aaPredicted RBP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 PTGDRQ13258 359 aa20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 SKIV2LQ15477 1246 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 PAN2Q504Q3 1202 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 PRPF31Q8WWY3 499 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 PCDHB6Q9Y5E3 794 aa20.46■□□□□ 0.87
SYNGR3-204ENST00000564642 H3BNC9 293 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 SRGAP2CP0DJJ0 459 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 SPATA31C1P0DKV0 1188 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 CTNNB1P35222 781 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 FAM189BP81408 668 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 GPM6BQ13491 265 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 RILPL1Q5EBL4 403 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 CATSPER3Q86XQ3 398 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 PIGOQ8TEQ8 1089 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 POLR3CQ9BUI4 534 aaPredicted RBP20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 RAB34Q9BZG1 259 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 ELAC1Q9H777 363 aaKnown RBP20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 ATP6V0A4Q9HBG4 840 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 TMEM161AQ9NX61 479 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 DACT1Q9NYF0 836 aa20.45■□□□□ 0.86
SYNGR3-204ENST00000564642 A0A087WWV3 80 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 LAD1O00515 517 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 MED24O75448 989 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms