RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CFAP69	A5D8W1	941 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TSHZ1	Q6ZSZ6	1077 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	NCAPG2	Q86XI2	1143 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ERI1	Q8IV48	349 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	FAXDC2	Q96IV6	333 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ANKRD36BP1	Q96IX9	119 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ZFP69B	Q9UJL9	534 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288		E9PMD0	336 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CYP27A1	Q02318	531 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RPS6KA2	Q15349	733 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PEX5L	Q8IYB4	626 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ATP11C	Q8NB49	1132 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ACSBG1	Q96GR2	724 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TCEANC2	Q96MN5	208 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CHP1	Q99653	195 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	KANSL1L	A0AUZ9	987 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	DNM1L	O00429	736 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	EYA4	O95677	639 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RAB14	P61106	215 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TBC1D10A	Q9BXI6	508 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	GOLGA8CP	A6NN73	597 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ATP9A	O75110	1047 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CARS	P49589	748 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	NT5DC1	Q5TFE4	455 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	C6orf89	Q6UWU4	347 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TUBGCP5	Q96RT8	1024 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	WASL	O00401	505 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RANBP6	O60518	1105 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RARS2	Q5T160	578 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TRIM31	Q9BZY9	425 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PHF2	O75151	1096 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SH3GLB2	Q9NR46	395 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	LRWD1	Q9UFC0	647 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	LRRIQ1	Q96JM4	1722 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PFAS	O15067	1338 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	FAM25A	B3EWG3	89 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	FAM25C	B3EWG5	89 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	FAM25G	B3EWG6	89 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SNX3	O60493	162 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SLC29A2	Q14542	456 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	RNF169	Q8NCN4	708 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	LTV1	Q96GA3	475 aa	Predicted RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ADAMTS1	Q9UHI8	967 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	BTBD19	C9JJ37	291 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CAVIN4	Q5BKX8	364 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	TTC38	Q5R3I4	469 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CARD9	Q9H257	536 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ARHGAP26	Q9UNA1	814 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	DEFA1	P59665	94 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	DEFA3	P59666	94 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	DRD4	P21917	467 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	L3MBTL1	Q9Y468	752 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CAPN9	O14815	690 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	VPS41	P49754	854 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	KIF22	Q14807	665 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ALX1	Q15699	326 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SAMD3	Q8N6K7	520 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SPATA5	Q8NB90	893 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PRPF31	Q8WWY3	499 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	KCNK16	Q96T55	309 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	NDEL1	Q9GZM8	345 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	COPRS	Q9NQ92	184 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	GOLGA8IP	A6NC78	632 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	IDH3B	O43837	385 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PYGB	P11216	843 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ATF2	P15336	505 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	HMOX2	P30519	316 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	OLFML1	Q6UWY5	402 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	LENG1	Q96BZ8	264 aa	Predicted RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	FAM153A	Q9UHL3	310 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CROT	Q9UKG9	612 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	EEF1B2	P24534	225 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PPP1R2P1	Q96PQ5	205 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	C8orf4	Q9NR00	106 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ANGPTL3	Q9Y5C1	460 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288		A0A087WXM4	84 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	TEX33	O43247	280 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CSB-PGBD3	P0DP91	1061 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	KCNA3	P22001	575 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	INF2	Q27J81	1249 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CMPK2	Q5EBM0	449 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	BEND3	Q5T5X7	828 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	U2AF1L4	Q8WU68	220 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PNMA6E	A0A0J9YXQ4	647 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	BTBD18	B2RXH4	712 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	GIPC1	O14908	333 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	KLHL41	O60662	606 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CYFIP1	Q7L576	1253 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PSMB7	Q99436	277 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	IRX2	Q9BZI1	471 aa	Predicted RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	FBXL5	Q9UKA1	691 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SPOP	O43791	374 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	THRA	P10827	490 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	USP11	P51784	963 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT81	Q14533	505 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	MANSC1	Q9H8J5	431 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CYP39A1	Q9NYL5	469 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ACTL7B	Q9Y614	415 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SPHKAP	Q2M3C7	1700 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms