RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 FEM1BQ9UK73 627 aa21.78■■□□□ 1.08
MSLN-205ENST00000563941 DNAJC12Q9UKB3 198 aa21.78■■□□□ 1.08
MSLN-205ENST00000563941 TNS1Q9HBL0 1735 aaKnown RBP21.77■■□□□ 1.08
MSLN-205ENST00000563941 ARHGEF35A5YM69 484 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 TRIM49P0CI25 452 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 TRIM49CP0CI26 452 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 SLFN11Q7Z7L1 901 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 OLIG1Q8TAK6 271 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 LMBR1Q8WVP7 490 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 ZIM3Q96PE6 472 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 SHOX2O60902 331 aaPredicted RBP21.77■■□□□ 1.08
MSLN-205ENST00000563941 HIP1RO75146 1068 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 ZBTB48P10074 688 aaPredicted RBP21.77■■□□□ 1.08
MSLN-205ENST00000563941 DRAP1Q14919 205 aaPredicted RBP21.77■■□□□ 1.08
MSLN-205ENST00000563941 PPP2R5AQ15172 486 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 MIGA2Q7L4E1 593 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 PEX26Q7Z412 305 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 SLC30A5Q8TAD4 765 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 GMLQ99445 158 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 MXRA8Q9BRK3 442 aa21.77■■□□□ 1.08
MSLN-205ENST00000563941 GLIS2Q9BZE0 524 aaPredicted RBP21.77■■□□□ 1.08
MSLN-205ENST00000563941 INTS2Q9H0H0 1204 aaKnown RBP21.77■■□□□ 1.08
MSLN-205ENST00000563941 TMCO5BA8MYB1 307 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 DDX39AO00148 427 aaKnown RBP21.76■■□□□ 1.07
MSLN-205ENST00000563941 GALCP54803 685 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 MAPK7Q13164 816 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 OGFOD1Q8N543 542 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 METTL13Q8N6R0 699 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 SCFD2Q8WU76 684 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 CCDC43Q96MW1 224 aaKnown RBP21.76■■□□□ 1.07
MSLN-205ENST00000563941 RIT2Q99578 217 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 TMEM39BQ9GZU3 492 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 STXBP5LQ9Y2K9 1186 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 PGRMC1O00264 195 aaKnown RBP21.76■■□□□ 1.07
MSLN-205ENST00000563941 MYL7Q01449 175 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 TTMPQ5BVD1 217 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 DAW1Q8N136 415 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 ARL8AQ96BM9 186 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 STRA6Q9BX79 667 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 GPR88Q9GZN0 384 aa21.76■■□□□ 1.07
MSLN-205ENST00000563941 SUCLA2Q9P2R7 463 aaPredicted RBP21.76■■□□□ 1.07
MSLN-205ENST00000563941 TBC1D12O60347 775 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 PPP1R37O75864 691 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 CLSTN1O94985 981 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 ITGB5P18084 799 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 LMNB1P20700 586 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 CAP2P40123 477 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 GUCY2FP51841 1108 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 NPEPPSP55786 919 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 TRADDQ15628 312 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 DAAM2Q86T65 1068 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 GLYCTKQ8IVS8 523 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 SYCP3Q8IZU3 236 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 SYCE1Q8N0S2 351 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 MREGQ8N565 214 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 NEK9Q8TD19 979 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 WHAMMQ8TF30 809 aa21.75■■□□□ 1.07
MSLN-205ENST00000563941 ZBTB12Q9Y330 459 aaPredicted RBP21.75■■□□□ 1.07
MSLN-205ENST00000563941 NOC2LQ9Y3T9 749 aaKnown RBP21.75■■□□□ 1.07
MSLN-205ENST00000563941 EXOC3O60645 756 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 HSD17B4P51659 736 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 BFSP1Q12934 665 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 CFAP58Q5T655 872 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 SLC9A9Q8IVB4 645 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 CALR3Q96L12 384 aaKnown RBP21.74■■□□□ 1.07
MSLN-205ENST00000563941 AGBL1Q96MI9 1066 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.74■■□□□ 1.07
MSLN-205ENST00000563941 DEFB129Q9H1M3 183 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 PKD2L1Q9P0L9 805 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 APEX2Q9UBZ4 518 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 RGPD3A6NKT7 1758 aaPredicted RBP21.74■■□□□ 1.07
MSLN-205ENST00000563941 RGPD4Q7Z3J3 1758 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 K7ENM7 598 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 PLS1Q14651 629 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 PADI6Q6TGC4 694 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 MIER3Q7Z3K6 550 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 NT5DC3Q86UY8 548 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 IQCKQ8N0W5 287 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 SYT11Q9BT88 431 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 AP1M1Q9BXS5 423 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 CCPG1Q9ULG6 757 aa21.74■■□□□ 1.07
MSLN-205ENST00000563941 PPFIA4O75335 1185 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 PTGER2P43116 358 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 GRIPAP1Q4V328 841 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 SRLQ86TD4 932 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 TAF1DQ9H5J8 278 aaPredicted RBP21.73■■□□□ 1.07
MSLN-205ENST00000563941 LCMT1Q9UIC8 334 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 NCANO14594 1321 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 GOLGB1Q14789 3259 aaKnown RBP21.73■■□□□ 1.07
MSLN-205ENST00000563941 ICAM1P05362 532 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 BCRP11274 1271 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 COL4A5P29400 1685 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 ERVK-9P63128 1117 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 MAEAQ7L5Y9 396 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 LARGE2Q8N3Y3 721 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 RASGEF1CQ8N431 466 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 RDH13Q8NBN7 331 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 ISCUQ9H1K1 167 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 OSGEPQ9NPF4 335 aa21.73■■□□□ 1.07
MSLN-205ENST00000563941 KCNH7Q9NS40 1196 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms