RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ZNF746Q6NUN9 644 aaPredicted RBP11.3□□□□□ -0.6
RNF40-204ENST00000563683 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 KCNK18Q7Z418 384 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 MCF2L2Q86YR7 1114 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 PLAAQ9Y263 795 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
RNF40-204ENST00000563683 SCN11AQ9UI33 1791 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 IPO5O00410 1097 aaKnown RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 GKAP1Q5VSY0 366 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 DENND2CQ68D51 928 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 EIF1ADQ8N9N8 165 aaKnown RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 MGARPQ8TDB4 240 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 TMBIM4Q9HC24 238 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 ARHGAP20Q9P2F6 1191 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 LCA5LO95447 670 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 GLI1P08151 1106 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 LIG4P49917 911 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 MXI1P50539 228 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 ZNF211Q13398 564 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 DRAP1Q14919 205 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 DAAM1Q9Y4D1 1078 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 DDTLA6NHG4 134 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 LRRIQ4A6NIV6 560 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 RSPH10B2B2RC85 870 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 PJA2O43164 708 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 MED24O75448 989 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 RSPH10BP0C881 870 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 UCHL3P15374 230 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 HSPA9P38646 679 aaKnown RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 IRX1P78414 480 aaPredicted RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 SLC18A3Q16572 532 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 ANKRD20A8PQ5CZ79 823 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 PLCB1Q9NQ66 1216 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
RNF40-204ENST00000563683 PRR12Q9ULL5 1215 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
RNF40-204ENST00000563683 ZNF263O14978 683 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 CD19P15391 556 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 CYP11B2P19099 503 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 SLC8A3P57103 927 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 ZKSCAN8Q15776 578 aaPredicted RBP11.28□□□□□ -0.6
RNF40-204ENST00000563683 PNMA5Q96PV4 448 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 ACCSQ96QU6 501 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
RNF40-204ENST00000563683 KCNQ5Q9NR82 932 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 A0A087X0T9 212 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 RGS16O15492 202 aaPredicted RBP11.28□□□□□ -0.6
RNF40-204ENST00000563683 FAM153BP0C7A2 387 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 FAM228BP0C875 321 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 BAG6P46379 1132 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 PDE6CP51160 858 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 PRELPP51888 382 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 TNFAIP1Q13829 316 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 FAM153CQ494X1 144 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 DCUN1D2Q6PH85 259 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 PBKQ96KB5 322 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 LXNQ9BS40 222 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 BLOC1S4Q9NUP1 217 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 SAMD15Q9P1V8 674 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 NYAP2Q9P242 653 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 FAM153AQ9UHL3 310 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 CCDC189A1A4V9 331 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 BUB1BO60566 1050 aaPredicted RBP11.28□□□□□ -0.6
RNF40-204ENST00000563683 GHRP10912 638 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 IL1R1P14778 569 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 DESP17661 470 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 SNX1Q13596 522 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 NAA25Q14CX7 972 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 CEP55Q53EZ4 464 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 LACTB2Q53H82 288 aaPredicted RBP11.28□□□□□ -0.6
RNF40-204ENST00000563683 STRIP1Q5VSL9 837 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 TLR10Q9BXR5 811 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 STMN4Q9H169 189 aaPredicted RBP11.28□□□□□ -0.6
RNF40-204ENST00000563683 KMT5AQ9NQR1 393 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 HAUS2Q9NVX0 235 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
RNF40-204ENST00000563683 LAMB4A4D0S4 1761 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 SSU72P8A0A1W2PR75 194 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 TRAPPC3O43617 180 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 KLRC4O43908 158 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 DKC1O60832 514 aaKnown RBP eCLIP11.27□□□□□ -0.6
RNF40-204ENST00000563683 RHBDL3P58872 404 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 CUL1Q13616 776 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms