RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 PUM3Q15397 648 aaKnown RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 CRY2Q49AN0 593 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 BMP2KLQ5H9B9 411 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 TTC22Q5TAA0 569 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 TDRD10Q5VZ19 366 aaKnown RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 DCAF15Q66K64 600 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 STYK1Q6J9G0 422 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 SKAP1Q86WV1 359 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 VPS37DQ86XT2 251 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 TMEFF1Q8IYR6 380 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 ZNF654Q8IZM8 581 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 CNTROBQ8N137 903 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 FIBCD1Q8N539 461 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 LINC01356Q8N9X3 169 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 OR6P1Q8NGX9 317 aa5.56□□□□□ -1.52
CDR2-203ENST00000563573 CELF1Q92879 486 aaKnown RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 PDGFDQ9GZP0 370 aaPredicted RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 GNL3LQ9NVN8 582 aaKnown RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 DDX41Q9UJV9 622 aaKnown RBP5.56□□□□□ -1.52
CDR2-203ENST00000563573 XDHP47989 1333 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 HIP1O00291 1037 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 SCAMP3O14828 347 aaKnown RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 FRAT2O75474 233 aaPredicted RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 TP53P04637 393 aaPredicted RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 TTF1Q15361 905 aaPredicted RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 ZNF394Q53GI3 561 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 PPFIBP1Q86W92 1011 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 CXorf38Q8TB03 319 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDR2-203ENST00000563573 BRF1Q92994 677 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 EVI5LQ96CN4 794 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 PWWP2AQ96N64 755 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 PTCHD1Q96NR3 888 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 GBP3Q9H0R5 595 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 UPF2Q9HAU5 1272 aaKnown RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 SPON1Q9HCB6 807 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 EPB41L4AQ9HCS5 686 aaPredicted RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 WHRNQ9P202 907 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 TNRC6CQ9HCJ0 1690 aaKnown RBP5.55□□□□□ -1.52
CDR2-203ENST00000563573 A0A1B0GUL6 1792 aa5.55□□□□□ -1.52
CDR2-203ENST00000563573 MYH13Q9UKX3 1938 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 ZNF804BA4D1E1 1349 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 SALL3Q9BXA9 1300 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 A0A0G2JLL6 359 aaPredicted RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 SDSP20132 328 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 FGFR2P21802 821 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 HIBADHP31937 336 aaKnown RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 L1CAMP32004 1257 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 BICRALQ6AI39 1079 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 RCSD1Q6JBY9 416 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 ZSCAN25Q6NSZ9 544 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 DPP8Q6V1X1 898 aaPredicted RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 CABP7Q86V35 215 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 TICAM2Q86XR7 235 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 TTLL6Q8N841 843 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 VGLL2Q8N8G2 317 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 C19orf47Q8N9M1 422 aaKnown RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 SUPT20HQ8NEM7 779 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 OTUD7AQ8TE49 926 aaPredicted RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 FCRL3Q96P31 734 aaPredicted RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 EYA3Q99504 573 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 DNAJC2Q99543 621 aaKnown RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 RNF38Q9H0F5 515 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 XYLT2Q9H1B5 865 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 BOLA2Q9H3K6 86 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 NOL6Q9H6R4 1146 aaKnown RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 PPP1R1BQ9UD71 204 aaPredicted RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 DBNLQ9UJU6 430 aaKnown RBP5.54□□□□□ -1.52
CDR2-203ENST00000563573 ATP6V0A2Q9Y487 856 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 ZNF451Q9Y4E5 1061 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 PCDHGB7Q9Y5F8 929 aa5.54□□□□□ -1.52
CDR2-203ENST00000563573 KIF13BQ9NQT8 1826 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 DLEC1Q9Y238 1755 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 CHD4Q14839 1912 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 A0A0G2JLW4 131 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 CDC45O75419 566 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 PPM1BO75688 479 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 MAP4K4O95819 1239 aaPredicted RBP5.53□□□□□ -1.52
CDR2-203ENST00000563573 DBHP09172 617 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 CHRNA5P30532 468 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 BUD31P41223 144 aaPredicted RBP5.53□□□□□ -1.52
CDR2-203ENST00000563573 EIF6P56537 245 aaKnown RBP5.53□□□□□ -1.52
CDR2-203ENST00000563573 GPSM2P81274 684 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 ZYXQ15942 572 aaKnown RBP5.53□□□□□ -1.52
CDR2-203ENST00000563573 SOGA3Q5TF21 947 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 TSHZ3Q63HK5 1081 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 HEATR6Q6AI08 1181 aaKnown RBP5.53□□□□□ -1.52
CDR2-203ENST00000563573 ZNF804AQ7Z570 1209 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 RTKN2Q8IZC4 609 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 HAUS7Q99871 368 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 IGSF5Q9NSI5 407 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 DIAPH3Q9NSV4 1193 aa5.53□□□□□ -1.52
CDR2-203ENST00000563573 PAG1Q9NWQ8 432 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms