RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 CCDC83Q8IWF9 413 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 DIS3L2Q8IYB7 885 aaKnown RBP17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 RNF169Q8NCN4 708 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 IGFLR1Q9H665 355 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 RGL1Q9NZL6 768 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 SUCLA2Q9P2R7 463 aaPredicted RBP17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 WRAP73Q9P2S5 460 aaPredicted RBP17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 PLAGL2Q9UPG8 496 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
LPCAT4-204ENST00000563240 TRANK1O15050 2925 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 A0A087WZ62 844 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 H3BQ06 376 aaPredicted RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 TBX3O15119 743 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 MAFO75444 373 aaPredicted RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 ITGB1P05556 798 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 DARSP14868 501 aaKnown RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 FAM189BP81408 668 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 CYP4A11Q02928 519 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 EPHA7Q15375 998 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 RHPN2Q8IUC4 686 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 CEP170P1Q96L14 293 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 CLDND1Q9NY35 253 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 REV3LO60673 3130 aa17.1■□□□□ 0.33
LPCAT4-204ENST00000563240 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 WNT7AO00755 349 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 ZBTB39O15060 712 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 DNAJB1P25685 340 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 TPH2Q8IWU9 490 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 DYDC2Q96IM9 177 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 LXNQ9BS40 222 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 TYW1Q9NV66 732 aaKnown RBP17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 TMEM161AQ9NX61 479 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 TTC28Q96AY4 2481 aa17.09■□□□□ 0.33
LPCAT4-204ENST00000563240 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 YWHABP31946 246 aaKnown RBP17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 TXKP42681 527 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 CAMK1Q14012 370 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 CALCRLQ16602 461 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 LEXMQ3ZCV2 418 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 SPPL3Q8TCT6 385 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 TMEM143Q96AN5 459 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.32
LPCAT4-204ENST00000563240 NLRC5Q86WI3 1866 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 A0A087WWV3 80 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 IL9P15248 144 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 IRS1P35568 1242 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 POLGP54098 1239 aaPredicted RBP17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 SPIRE1Q08AE8 756 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 XKR9Q5GH70 373 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 ECHDC2Q86YB7 292 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 ABI1Q8IZP0 508 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 MICAL1Q8TDZ2 1067 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 P2RX5Q93086 422 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 PABPC5Q96DU9 382 aaKnown RBP17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 KIF2CQ99661 725 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 ELAC1Q9H777 363 aaKnown RBP17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 AAASQ9NRG9 546 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 PCDHB12Q9Y5F1 795 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 PCDHGC5Q9Y5F6 944 aa17.07■□□□□ 0.32
LPCAT4-204ENST00000563240 SRGAP2CP0DJJ0 459 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 CDC42EP1Q00587 391 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 HYAL1Q12794 435 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 CLUL1Q15846 466 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 FAM43BQ6ZT52 329 aaPredicted RBP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 OTUD6AQ7L8S5 288 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 RBM23Q86U06 439 aaKnown RBP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 C4orf19Q8IY42 314 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 PRPF31Q8WWY3 499 aaKnown RBP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 CASD1Q96PB1 797 aa17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 EIF2AK1Q9BQI3 630 aaKnown RBP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 JPH2Q9BR39 696 aaPredicted RBP17.06■□□□□ 0.32
LPCAT4-204ENST00000563240 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms