RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MUTP22033 750 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 DNAJB2P25686 324 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 ARL2P36404 184 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 POLGP54098 1239 aaPredicted RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 DSC3Q14574 896 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 EMC2Q15006 297 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 HYIQ5T013 277 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 Q7L0L9 218 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 ERMNQ8TAM6 284 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 LRRC15Q8TF66 581 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 PRPF31Q8WWY3 499 aaKnown RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 SLC7A3Q8WY07 619 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 MAP7D2Q96T17 732 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 SLC9A7Q96T83 725 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 TTYH1Q9H313 450 aaPredicted RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 ZSCAN16Q9H4T2 348 aaPredicted RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 FBXO2Q9UK22 296 aaPredicted RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 ST3GAL5Q9UNP4 418 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 KIAA1024Q9UPX6 916 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 GINS2Q9Y248 185 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 MORC2Q9Y6X9 1032 aaPredicted RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 MICAL3Q7RTP6 2002 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 A0A087WZ62 844 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 LCHNA4D1U4 455 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 CSDE1O75534 798 aaKnown RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 RPS6KA5O75582 802 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 BMP15O95972 392 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 F13A1P00488 732 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 FGFR4P22455 802 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 MARCKSP29966 332 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 KCNJ6P48051 423 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 NASPP49321 788 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 DNM2P50570 870 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 CEBPZQ03701 1054 aaKnown RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 LAMTOR4Q0VGL1 99 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 PAK2Q13177 524 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 GRB10Q13322 594 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 FOXD4L5Q5VV16 416 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 HAUS3Q68CZ6 603 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 RHPN2Q8IUC4 686 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 EXOC8Q8IYI6 725 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 ZNF710Q8N1W2 664 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 ASAP3Q8TDY4 903 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 FOXD4L4Q8WXT5 416 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 GBF1Q92538 1859 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 TOP1MTQ969P6 601 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 JPH2Q9BR39 696 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 FDXACB1Q9BRP7 624 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 RAB34Q9BZG1 259 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 TSPYL2Q9H2G4 693 aaPredicted RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 SEMA6BQ9H3T3 888 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 IFT122Q9HBG6 1241 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 GPRC5CQ9NQ84 441 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 DDX19AQ9NUU7 478 aaKnown RBP9.52□□□□□ -0.89
UBR1-204ENST00000563239 PCDHA11Q9Y5I1 949 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 COL4A3BPQ9Y5P4 624 aa9.52□□□□□ -0.89
UBR1-204ENST00000563239 COL4A6Q14031 1691 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 CACNA1AO00555 2505 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 E9PMD0 336 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 GAS2O43903 313 aaKnown RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 USO1O60763 962 aaKnown RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 DGAT1O75907 488 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 GJB5O95377 273 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 BRD1O95696 1058 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 AMHP03971 560 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 CYP11B2P19099 503 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 GLRA2P23416 452 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 FAM189BP81408 668 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 HTRA4P83105 476 aaPredicted RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 CDC42EP1Q00587 391 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 SLC39A14Q15043 492 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 KRT79Q5XKE5 535 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 SPRED2Q7Z698 418 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 ZNF410Q86VK4 478 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 MYOCDQ8IZQ8 938 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 PSPC1Q8WXF1 523 aaKnown RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 TIFAQ96CG3 184 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 AK8Q96MA6 479 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 MTRQ99707 1265 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 CSRNP2Q9H175 543 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 BHMT2Q9H2M3 363 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 NKX2-4Q9H2Z4 354 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 MINDY3Q9H8M7 445 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 ATP6V0A4Q9HBG4 840 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 SRPRBQ9Y5M8 271 aaKnown RBP9.51□□□□□ -0.89
UBR1-204ENST00000563239 STK24Q9Y6E0 443 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
UBR1-204ENST00000563239 ARHGEF35A5YM69 484 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 C9IYK1 514 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 GPR182O15218 404 aa9.5□□□□□ -0.89
UBR1-204ENST00000563239 EYA4O95677 639 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms