RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 MRPL9Q9BYD2 267 aaKnown RBP17.83■□□□□ 0.44
HERPUD1-205ENST00000562914 C6orf50Q9HD87 102 aa17.83■□□□□ 0.44
HERPUD1-205ENST00000562914 DACT1Q9NYF0 836 aa17.83■□□□□ 0.44
HERPUD1-205ENST00000562914 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
HERPUD1-205ENST00000562914 AKT3Q9Y243 479 aa17.83■□□□□ 0.44
HERPUD1-205ENST00000562914 KMT2EQ8IZD2 1858 aa17.83■□□□□ 0.44
HERPUD1-205ENST00000562914 A0A0U1RQF3 1178 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 WDR64B1ANS9 1081 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 NLRP11P59045 1033 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 APOBRQ0VD83 1088 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 MTMR3Q13615 1198 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 EFCAB12Q6NXP0 572 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 LRRC55Q6ZSA7 311 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 ECHDC2Q86YB7 292 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 LINC01465Q8N7H1 131 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 MRPL43Q8N983 215 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 PHOX2BQ99453 314 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 ADAM7Q9H2U9 754 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 ADAMTS10Q9H324 1103 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 GABBR1Q9UBS5 961 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 SORCS3Q9UPU3 1222 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 SAMM50Q9Y512 469 aa17.82■□□□□ 0.44
HERPUD1-205ENST00000562914 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 HIDE1A8MVS5 230 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 CIITAP33076 1130 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 MTHFRP42898 656 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 CLCN3P51790 818 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 GIT2Q14161 759 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 BICD2Q8TD16 824 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 PPP1R16BQ96T49 567 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 RNF19AQ9NV58 838 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 HCFC2Q9Y5Z7 792 aa17.81■□□□□ 0.44
HERPUD1-205ENST00000562914 OATP04181 439 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 SFNP31947 248 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 ALDH7A1P49419 539 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 VCPP55072 806 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 LLGL2Q6P1M3 1020 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 DZANK1Q9NVP4 752 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 EVPLQ92817 2033 aa17.8■□□□□ 0.44
HERPUD1-205ENST00000562914 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 ZDBF2Q9HCK1 2354 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 C2orf71A6NGG8 1288 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 GFRA3O60609 400 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 DARSP14868 501 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 CDC27P30260 824 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 METAP2P50579 478 aaKnown RBP eCLIP17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 GPC3P51654 580 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 PRR16Q569H4 304 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 KREMEN2Q8NCW0 462 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 ATOH1Q92858 354 aaPredicted RBP17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 TMEM169Q96HH4 297 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 SNX27Q96L92 541 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 SCLT1Q96NL6 688 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 RIT2Q99578 217 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
HERPUD1-205ENST00000562914 PROB1E7EW31 1015 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 SKIP12755 728 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 JAK3P52333 1124 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 POLGP54098 1239 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 FGD1P98174 961 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 BMP2KLQ5H9B9 411 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 CLLU1OSQ5K130 101 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 ZNF598Q86UK7 904 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 LRRC71Q8N4P6 559 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 TMEM87AQ8NBN3 555 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 CCDC148Q8NFR7 591 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 RDM1Q8NG50 284 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 DISC1Q9NRI5 854 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 USTQ9Y2C2 406 aa17.78■□□□□ 0.44
HERPUD1-205ENST00000562914 PRPF3O43395 683 aaKnown RBP17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 USP11P51784 963 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 AKAP17AQ02040 695 aaKnown RBP17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 PRKCEQ02156 737 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 TBC1D8BQ0IIM8 1120 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 ZDHHC14Q8IZN3 488 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 RNF169Q8NCN4 708 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 NLRP7Q8WX94 980 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 APOL5Q9BWW9 433 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 INO80BQ9C086 356 aaPredicted RBP17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 POMKQ9H5K3 350 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.44
HERPUD1-205ENST00000562914 NID2Q14112 1375 aa17.77■□□□□ 0.43
HERPUD1-205ENST00000562914 ZNF862O60290 1169 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 PBX3P40426 434 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms