RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 ASB2Q96Q27 587 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 MAP7D2Q96T17 732 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 FTHL17Q9BXU8 183 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 SEPT9Q9UHD8 586 aaPredicted RBP12.9□□□□□ -0.34
FANCA-209ENST00000562424 PCDHA12Q9UN75 941 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 GINS2Q9Y248 185 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 KIF3AQ9Y496 699 aa12.9□□□□□ -0.34
FANCA-209ENST00000562424 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
FANCA-209ENST00000562424 RALGAPA2Q2PPJ7 1873 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 BDP1A6H8Y1 2624 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 ENPP3O14638 875 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 UPP2O95045 317 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 COL9A1P20849 921 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
FANCA-209ENST00000562424 MCM7P33993 719 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
FANCA-209ENST00000562424 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 MTERF2Q49AM1 385 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 ANO5Q75V66 913 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 C4orf19Q8IY42 314 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 LRRC71Q8N4P6 559 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 TMEM40Q8WWA1 233 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 LINC01599Q8WXQ3 324 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 LXNQ9BS40 222 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 TMEM60Q9H2L4 133 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
FANCA-209ENST00000562424 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 ERVK-5Q9HDB9 667 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 WRAP73Q9P2S5 460 aaPredicted RBP12.89□□□□□ -0.35
FANCA-209ENST00000562424 AKT3Q9Y243 479 aa12.89□□□□□ -0.35
FANCA-209ENST00000562424 NOC2LQ9Y3T9 749 aaKnown RBP12.89□□□□□ -0.35
FANCA-209ENST00000562424 IGKV6-21A0A0C4DH24 114 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 RPS6KA5O75582 802 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 TXKP42681 527 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 NLRP11P59045 1033 aaKnown RBP12.88□□□□□ -0.35
FANCA-209ENST00000562424 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
FANCA-209ENST00000562424 TMEM266Q2M3C6 531 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 SPRED2Q7Z698 418 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
FANCA-209ENST00000562424 ARNTL2Q8WYA1 636 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 DYDC2Q96IM9 177 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 PPP1R16BQ96T49 567 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 OSMRQ99650 979 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 ADAMTS10Q9H324 1103 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 TMX1Q9H3N1 280 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 CERS4Q9HA82 394 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 RGL1Q9NZL6 768 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
FANCA-209ENST00000562424 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 GPR182O15218 404 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 GJB2P29033 226 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 GPC3P51654 580 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 NPEPPSP55786 919 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 ERVK-21P61565 698 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 CYP4A11Q02928 519 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 NFX1Q12986 1120 aaKnown RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 DRP2Q13474 957 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 CTTNQ14247 550 aaKnown RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 ZNF174Q15697 407 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 FAM228AQ86W67 206 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 EIF2AK1Q9BQI3 630 aaKnown RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
FANCA-209ENST00000562424 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
FANCA-209ENST00000562424 RFXAPO00287 272 aa12.86□□□□□ -0.35
FANCA-209ENST00000562424 SLITRK3O94933 977 aa12.86□□□□□ -0.35
FANCA-209ENST00000562424 LYPLA2O95372 231 aa12.86□□□□□ -0.35
FANCA-209ENST00000562424 HOXB3P14651 431 aaPredicted RBP12.86□□□□□ -0.35
FANCA-209ENST00000562424 POU3F3P20264 500 aaPredicted RBP12.86□□□□□ -0.35
FANCA-209ENST00000562424 IGFBP4P22692 258 aa12.86□□□□□ -0.35
FANCA-209ENST00000562424 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
FANCA-209ENST00000562424 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
FANCA-209ENST00000562424 DNM2P50570 870 aa12.86□□□□□ -0.35
FANCA-209ENST00000562424 CDC42EP1Q00587 391 aa12.86□□□□□ -0.35
FANCA-209ENST00000562424 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms