RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 CWC22Q9HCG8 908 aaKnown RBP7.06□□□□□ -1.28
UBR1-203ENST00000562173 PFDN2Q9UHV9 154 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 PTCH2Q9Y6C5 1203 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 LAMA3Q16787 3333 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 CCDC163A0A0D9SF12 145 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 NPHP3-ACAD11A0A0J9YXS1 232 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 UFL1O94874 794 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 PAPLNO95428 1278 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 VIL1P09327 827 aaKnown RBP7.05□□□□□ -1.28
UBR1-203ENST00000562173 PPP2R1AP30153 589 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 RTP1P59025 263 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 SLC14A2Q15849 920 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 SLC35F1Q5T1Q4 408 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
UBR1-203ENST00000562173 DPF2Q92785 391 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 KIRREL1Q96J84 757 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 IER2Q9BTL4 223 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 LGR4Q9BXB1 951 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 MYOZ2Q9NPC6 264 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 EBF1Q9UH73 591 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
UBR1-203ENST00000562173 TRMT112Q9UI30 125 aaKnown RBP7.05□□□□□ -1.28
UBR1-203ENST00000562173 CDHR2Q9BYE9 1310 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 MEFVO15553 781 aaPredicted RBP7.04□□□□□ -1.28
UBR1-203ENST00000562173 PABPC1P11940 636 aaKnown RBP7.04□□□□□ -1.28
UBR1-203ENST00000562173 L1CAMP32004 1257 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 TM4SF4P48230 202 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 ZNF280AP59817 542 aaPredicted RBP7.04□□□□□ -1.28
UBR1-203ENST00000562173 SUMO1P63165 101 aaKnown RBP7.04□□□□□ -1.28
UBR1-203ENST00000562173 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 CRHR2Q13324 411 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 HSF5Q4G112 596 aaPredicted RBP7.04□□□□□ -1.28
UBR1-203ENST00000562173 RSPO2Q6UXX9 243 aaPredicted RBP7.04□□□□□ -1.28
UBR1-203ENST00000562173 Q7L0L9 218 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 ZSWIM9Q86XI8 627 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 JAMLQ86YT9 394 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 TMEM145Q8NBT3 493 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 TMEM52Q8NDY8 209 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 ABHD4Q8TB40 342 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 FRS2Q8WU20 508 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 PIF1Q9H611 641 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 CRTAC1Q9NQ79 661 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 PTPN22Q9Y2R2 807 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 EYSQ5T1H1 3165 aa7.04□□□□□ -1.28
UBR1-203ENST00000562173 A0A0C4DFX4 3053 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 UNC80Q8N2C7 3258 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 WNT10BO00744 389 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 IGSF3O75054 1194 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 BBOX1O75936 387 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 PLS3P13797 630 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 LTBRP36941 435 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 KCNJ6P48051 423 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 NSMFQ6X4W1 530 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 PPP1R42Q7Z4L9 355 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 NLRX1Q86UT6 975 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 SCUBE1Q8IWY4 988 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 PPIL6Q8IXY8 311 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 KREMEN2Q8NCW0 462 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 SLC17A8Q8NDX2 589 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 SUPT20HQ8NEM7 779 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 RTF1Q92541 710 aaKnown RBP7.03□□□□□ -1.28
UBR1-203ENST00000562173 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 IPO9Q96P70 1041 aaKnown RBP7.03□□□□□ -1.28
UBR1-203ENST00000562173 PLEKHF1Q96S99 279 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 KRTAP9-9Q9BYP9 154 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 CHPF2Q9P2E5 772 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 AK9Q5TCS8 1911 aa7.03□□□□□ -1.28
UBR1-203ENST00000562173 SH3TC1Q8TE82 1336 aa7.02□□□□□ -1.28
UBR1-203ENST00000562173 ARAP2Q8WZ64 1704 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 CLRN2A0PK11 232 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 NOTOA8MTQ0 251 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 DLX3O60479 287 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 GLI1P08151 1106 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 ECI1P42126 302 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 GRIA2P42262 883 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 TCIRG1Q13488 830 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 LAPTM5Q13571 262 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 SYNPOQ8N3V7 929 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 CERS5Q8N5B7 392 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 ASIC4Q96FT7 647 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 WNK4Q96J92 1243 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 JMJD8Q96S16 334 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 CDC6Q99741 560 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 ZFYVE21Q9BQ24 234 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 SLC6A17Q9H1V8 727 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 CLEC1BQ9P126 229 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 GPR160Q9UJ42 338 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 ACSL6Q9UKU0 697 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 NPFFR2Q9Y5X5 522 aa7.02□□□□□ -1.29
UBR1-203ENST00000562173 TRBV23-1A0A0A0MS06 115 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 F8W031 263 aaPredicted RBP7.01□□□□□ -1.29
UBR1-203ENST00000562173 PRODHO43272 600 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 GTF2A2P52657 109 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 KCNMB1Q16558 191 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 PARP10Q53GL7 1025 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 DACT2Q5SW24 774 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 OGFOD2Q6N063 350 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 MAMDC2Q7Z304 686 aaPredicted RBP7.01□□□□□ -1.29
UBR1-203ENST00000562173 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms