RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 COL4A1P02462 1669 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 O00370 1275 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 ANP32DO95626 131 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 CLTAP09496 248 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 LMNB1P20700 586 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 RASA1P20936 1047 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 PON1P27169 355 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 MYO1EQ12965 1108 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 GRIK3Q13003 919 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 PPP2R5AQ15172 486 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 TNFAIP8L3Q5GJ75 292 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 RFFLQ8WZ73 363 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 TBC1D31Q96DN5 1066 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 FAM212AQ96EL1 285 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 STAMBPL1Q96FJ0 436 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
BBS4-204ENST00000562084 MTRF1LQ9UGC7 380 aaKnown RBP20.19■□□□□ 0.82
BBS4-204ENST00000562084 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 PPP1R12BO60237 982 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 BAG3O95817 575 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 OAS1P00973 400 aaKnown RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 MYCNP04198 464 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 RPSAP08865 295 aaKnown RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 TMEM253P0C7T8 217 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 GOLGA8HP0CJ92 632 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 PRDX5P30044 214 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 ACCSLQ4AC99 568 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 KIAA1755Q5JYT7 1200 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 PNMA8AQ86V59 439 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 NEDD1Q8NHV4 660 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 RUNDC3BQ96NL0 473 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 NLRP3Q96P20 1036 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 NUDT12Q9BQG2 462 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 CELF4Q9BZC1 486 aaKnown RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 ROPN1BQ9BZX4 212 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 ROPN1Q9HAT0 212 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 HOMER3Q9NSC5 361 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 PODXLO00592 558 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 LUC7L3O95232 432 aaKnown RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 TDP2O95551 362 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 NR2F2P24468 414 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 PPP4CP60510 307 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 GALNTL6Q49A17 601 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 HERC4Q5GLZ8 1057 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 MFSD5Q6N075 450 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 CNKSR1Q969H4 720 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 PIGSQ96S52 555 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 ELAC2Q9BQ52 826 aaKnown RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 GOLPH3Q9H4A6 298 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 TMEM260Q9NX78 707 aa20.18■□□□□ 0.82
BBS4-204ENST00000562084 PPP1R1BQ9UD71 204 aaPredicted RBP20.18■□□□□ 0.82
BBS4-204ENST00000562084 KLRG2A4D1S0 409 aaPredicted RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 SPDYE3A6NKU9 549 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 DDX3YO15523 660 aaKnown RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 CALUO43852 315 aaPredicted RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 SNX3O60493 162 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 VIMP08670 466 aaKnown RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 XRCC5P13010 732 aaKnown RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 IBSPP21815 317 aaPredicted RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 CCNG1P51959 295 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 EPHA7Q15375 998 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 C11orf91Q3C1V1 193 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 TBC1D1Q86TI0 1168 aaPredicted RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 NELFCDQ8IXH7 590 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 ARMC2Q8NEN0 867 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 TRIM51Q9BSJ1 452 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 AZI2Q9H6S1 392 aa20.17■□□□□ 0.82
BBS4-204ENST00000562084 USP15Q9Y4E8 981 aaPredicted RBP20.17■□□□□ 0.82
BBS4-204ENST00000562084 WFS1O76024 890 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 SUN1O94901 812 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 GGPS1O95749 300 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 PLA2G4BP0C869 781 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 SLC9A1P19634 815 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 CHRNA3P32297 505 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 PDE6BP35913 854 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 STAT1P42224 750 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 NOVP48745 357 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 PPATQ06203 517 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 MAPK7Q13164 816 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 TAF1P21675 1872 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 DDX3XO00571 662 aaKnown RBP eCLIP20.16■□□□□ 0.82
BBS4-204ENST00000562084 PDXKO00764 312 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 KIAA0391O15091 583 aaKnown RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 SHBGP04278 402 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 ACTN1P12814 892 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 RPL13P26373 211 aaKnown RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 NCALDP61601 193 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 BZW1Q7L1Q6 419 aaKnown RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 JAMLQ86YT9 394 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 SLC30A5Q8TAD4 765 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 RBM46Q8TBY0 533 aaKnown RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 RNF25Q96BH1 459 aaPredicted RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 TAOK3Q9H2K8 898 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 GOPCQ9HD26 462 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 DDX25Q9UHL0 483 aaKnown RBP20.16■□□□□ 0.82
BBS4-204ENST00000562084 CD2APQ9Y5K6 639 aa20.16■□□□□ 0.82
BBS4-204ENST00000562084 RARAP10276 462 aa20.15■□□□□ 0.82
BBS4-204ENST00000562084 ATP5DP30049 168 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms