RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 BADQ92934 168 aa24.93■■□□□ 1.58
SYNGR3-202ENST00000562045 NIFKQ9BYG3 293 aaKnown RBP24.93■■□□□ 1.58
SYNGR3-202ENST00000562045 NRBP2Q9NSY0 501 aa24.93■■□□□ 1.58
SYNGR3-202ENST00000562045 BIN1O00499 593 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 C22orf31O95567 290 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 CAVIN2O95810 425 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 PLA2G4BP0C869 781 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 GNAT1P11488 350 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 RAG1P15918 1043 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 CASP1P29466 404 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 DHX8Q14562 1220 aaKnown RBP24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 PIGOQ8TEQ8 1089 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 SCLYQ96I15 445 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 C7orf25Q9BPX7 421 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 TRIM9Q9C026 710 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 PRKAG2Q9UGJ0 569 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 COL1A2P08123 1366 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 FSD2A1L4K1 749 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 YWHABP31946 246 aaKnown RBP24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 NLRP12P59046 1061 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 TRAF7Q6Q0C0 670 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 NACC1Q96RE7 527 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 MAN1B1Q9UKM7 699 aa24.92■■□□□ 1.58
SYNGR3-202ENST00000562045 CKBP12277 381 aa24.91■■□□□ 1.58
SYNGR3-202ENST00000562045 ANO6Q4KMQ2 910 aa24.91■■□□□ 1.58
SYNGR3-202ENST00000562045 DNAJB3Q8WWF6 145 aa24.91■■□□□ 1.58
SYNGR3-202ENST00000562045 OSBPL7Q9BZF2 842 aa24.91■■□□□ 1.58
SYNGR3-202ENST00000562045 RMND1Q9NWS8 449 aa24.91■■□□□ 1.58
SYNGR3-202ENST00000562045 LYPLA2O95372 231 aa24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 EYA4O95677 639 aa24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 ZNF618Q5T7W0 954 aa24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 FAM49AQ9H0Q0 323 aaPredicted RBP24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 BMP2KQ9NSY1 1161 aaPredicted RBP24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 PCDHA2Q9Y5H9 948 aa24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 LOXHD1Q8IVV2 1947 aa24.9■■□□□ 1.58
SYNGR3-202ENST00000562045 DKC1O60832 514 aaKnown RBP eCLIP24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 RPN1P04843 607 aaKnown RBP24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 SSBP05455 408 aaKnown RBP eCLIP24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 THPOP40225 353 aa24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 MAGEA10P43363 369 aaPredicted RBP24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 SLC12A3P55017 1021 aa24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 MORC3Q14149 939 aa24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 CNNM4Q6P4Q7 775 aa24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 SYT2Q8N9I0 419 aaPredicted RBP24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 VWCEQ96DN2 955 aa24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 CYP26B1Q9NR63 512 aa24.89■■□□□ 1.58
SYNGR3-202ENST00000562045 RBL2Q08999 1139 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 DRP2Q13474 957 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 GPNMBQ14956 572 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 ISM2Q6H9L7 571 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 LRRC71Q8N4P6 559 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 CCDC47Q96A33 483 aaKnown RBP24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 DNAJC25Q9H1X3 360 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 BHMT2Q9H2M3 363 aa24.89■■□□□ 1.57
SYNGR3-202ENST00000562045 TET1Q8NFU7 2136 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 MYMKA6NI61 221 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 PITPNM1O00562 1244 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 CTSHP09668 335 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 CSF2RAP15509 400 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 LAMA2P24043 3122 aaKnown RBP24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 EPHB4P54760 987 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 ASIC1P78348 528 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 TMEM62Q0P6H9 643 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 MKRN4PQ13434 485 aaPredicted RBP24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 KCNB1Q14721 858 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 DPCR1Q3MIW9 517 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 MFSD5Q6N075 450 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 LINC01465Q8N7H1 131 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 CAGE1Q8TC20 777 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 FAM200AQ8TCP9 573 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 CEP170P1Q96L14 293 aa24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 NAT10Q9H0A0 1025 aaKnown RBP24.88■■□□□ 1.57
SYNGR3-202ENST00000562045 IQCF3P0C7M6 154 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 CLCN3P51790 818 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 MBTPS1Q14703 1052 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 XKR9Q5GH70 373 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 GPBP1Q86WP2 473 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 KIAA0319LQ8IZA0 1049 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 DDX12PQ92771 950 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 RBSNQ9H1K0 784 aa24.87■■□□□ 1.57
SYNGR3-202ENST00000562045 RARRES1P49788 294 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 BFSP2Q13515 415 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 EFCAB12Q6NXP0 572 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 TAF2Q6P1X5 1199 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 METTL13Q8N6R0 699 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 SMIM35A0A1B0GVV1 85 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 PVALEFA0A1B0GWK0 134 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 XRCC6P12956 609 aaKnown RBP eCLIP24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 SELPP16109 830 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 CYP11B2P19099 503 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 ZNF165P49910 485 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 TBC1D8BQ0IIM8 1120 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 C11orf57Q6ZUT1 292 aaPredicted RBP24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 LRRC8DQ7L1W4 858 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 MLKLQ8NB16 471 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 RNF214Q8ND24 703 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 SUGCTQ9HAC7 445 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 DACH1Q9UI36 760 aa24.86■■□□□ 1.57
SYNGR3-202ENST00000562045 IGKV6-21A0A0C4DH24 114 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 KLRC4O43908 158 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms