RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 AKAP10O43572 662 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 SDHAP31040 664 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 SCAND1P57086 179 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 CD83Q01151 205 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 PLP2Q04941 152 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 KLF1Q13351 362 aaPredicted RBP8.42□□□□□ -1.06
SMG1-204ENST00000561940 PDCD1Q15116 288 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 NFE2Q16621 373 aaPredicted RBP8.42□□□□□ -1.06
SMG1-204ENST00000561940 ZFYVE27Q5T4F4 411 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 RASSF3Q86WH2 238 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 ZNF610Q8N9Z0 462 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 SCYL1Q96KG9 808 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 C16orf92Q96LL3 132 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 MENTQ9BUN1 341 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 ZDHHC5Q9C0B5 715 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 SEMA4AQ9H3S1 761 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 AASDHPPTQ9NRN7 309 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 TCEAL9Q9UHQ7 104 aa8.42□□□□□ -1.06
SMG1-204ENST00000561940 FZD9O00144 591 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 KDM1AO60341 852 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 SCGB1D2O95969 90 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 CHGBP05060 677 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 ZNF888P0CJ79 500 aaPredicted RBP8.41□□□□□ -1.06
SMG1-204ENST00000561940 SYN1P17600 705 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 LSP1P33241 339 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 CXorf38Q8TB03 319 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 CHMP4CQ96CF2 233 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 RTFDC1Q9BY42 306 aaPredicted RBP8.41□□□□□ -1.06
SMG1-204ENST00000561940 ADAM29Q9UKF5 820 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 NOC2LQ9Y3T9 749 aaKnown RBP8.41□□□□□ -1.06
SMG1-204ENST00000561940 ASB1Q9Y576 335 aa8.41□□□□□ -1.06
SMG1-204ENST00000561940 H2AFYO75367 372 aaKnown RBP8.4□□□□□ -1.06
SMG1-204ENST00000561940 CYP17A1P05093 508 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 KCNQ1P51787 676 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 RRADP55042 308 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 PIN1Q13526 163 aaPredicted RBP8.4□□□□□ -1.06
SMG1-204ENST00000561940 LRRC32Q14392 662 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 PCBP2Q15366 365 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMG1-204ENST00000561940 TBC1D10BQ4KMP7 808 aaPredicted RBP8.4□□□□□ -1.06
SMG1-204ENST00000561940 GPR158Q5T848 1215 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 NOL8Q76FK4 1167 aaKnown RBP8.4□□□□□ -1.06
SMG1-204ENST00000561940 OTOP2Q7RTS6 562 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 FUBP3Q96I24 572 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMG1-204ENST00000561940 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.06
SMG1-204ENST00000561940 PTPN18Q99952 460 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 BTBD2Q9BX70 525 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 JADE2Q9NQC1 790 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 ZIM2Q9NZV7 527 aa8.4□□□□□ -1.06
SMG1-204ENST00000561940 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 CD40P25942 277 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 POLD1P28340 1107 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 CSF2RBP32927 897 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 PPP2R5AQ15172 486 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 LIMS2Q7Z4I7 341 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 C1orf162Q8NEQ5 155 aaPredicted RBP8.39□□□□□ -1.07
SMG1-204ENST00000561940 TGFBRAP1Q8WUH2 860 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 FOXRED1Q96CU9 486 aaPredicted RBP8.39□□□□□ -1.07
SMG1-204ENST00000561940 OR10A5Q9H207 317 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 MAGEL2Q9UJ55 1249 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 MSRAQ9UJ68 235 aa8.39□□□□□ -1.07
SMG1-204ENST00000561940 B8ZZF3 427 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 TSPAN6O43657 245 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 FNTBP49356 437 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 FAPQ12884 760 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 NOLC1Q14978 699 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMG1-204ENST00000561940 EPHA7Q15375 998 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 ARHGEF18Q6ZSZ5 1173 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 RALYLQ86SE5 291 aaKnown RBP8.38□□□□□ -1.07
SMG1-204ENST00000561940 RTN4RL1Q86UN2 441 aaPredicted RBP8.38□□□□□ -1.07
SMG1-204ENST00000561940 LMBR1Q8WVP7 490 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
SMG1-204ENST00000561940 GOLGA8AA7E2F4 631 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 GOLGA8BA8MQT2 603 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 CELA3BP08861 270 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 CLEC2LP0C7M8 214 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 GPR3P46089 330 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 RGS3P49796 1198 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 PPP2CBP62714 309 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 PPP2CAP67775 309 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 SLC6A3Q01959 620 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 TOP3AQ13472 1001 aaPredicted RBP8.37□□□□□ -1.07
SMG1-204ENST00000561940 MOGSQ13724 837 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 STILQ15468 1287 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 PGM2L1Q6PCE3 622 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 FRMD7Q6ZUT3 714 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 WDR75Q8IWA0 830 aaKnown RBP8.37□□□□□ -1.07
SMG1-204ENST00000561940 CARD11Q9BXL7 1154 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 KATNBL1Q9H079 304 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 CDH19Q9H159 772 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 POFUT1Q9H488 388 aa8.37□□□□□ -1.07
SMG1-204ENST00000561940 LAMTOR5O43504 91 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA12O60330 932 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 PLATP00750 562 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 ALDH6A1Q02252 535 aaKnown RBP8.36□□□□□ -1.07
SMG1-204ENST00000561940 USP10Q14694 798 aaKnown RBP8.36□□□□□ -1.07
SMG1-204ENST00000561940 ODF1Q14990 250 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 KANK2Q63ZY3 851 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 ZZZ3Q8IYH5 903 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 CALML6Q8TD86 181 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 FAXDC2Q96IV6 333 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms