RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 KRT37O76014 449 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 KRT14P02533 472 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 GCFC2P16383 781 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TFAMQ00059 246 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 DRP2Q13474 957 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 KIF19Q2TAC6 998 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TMEM154Q6P9G4 183 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TRIM67Q6ZTA4 783 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 LONP2Q86WA8 852 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 ARL8AQ96BM9 186 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 APOL6Q9BWW8 343 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 BHMT2Q9H2M3 363 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 VIPAS39Q9H9C1 493 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 SLC40A1Q9NP59 571 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 SNX12Q9UMY4 172 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 ANGPTL3Q9Y5C1 460 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 WDR64B1ANS9 1081 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 STXBP3O00186 592 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 PCYT1AP49585 367 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 CORO7P57737 925 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 OCA2Q04671 838 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 DEUP1Q05D60 604 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 THOC5Q13769 683 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 PLCB4Q15147 1175 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 CCNI2Q6ZMN8 369 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 C1orf54Q8WWF1 131 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 NACC1Q96RE7 527 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 F5H423 210 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 NVLO15381 856 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 OATP04181 439 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 S100BP04271 92 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 PLA2G4AP47712 749 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 CCDC137Q6PK04 289 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 RAPGEF5Q92565 580 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 CCDC124Q96CT7 223 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 PRPSAP2O60256 369 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 SUPT3HO75486 399 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TJP3O95049 919 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TTLL1O95922 423 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 LSP1P33241 339 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 PPP2R3CQ969Q6 453 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 ADGBQ8N7X0 1667 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 HSPA9P38646 679 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 IRAK1P51617 712 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 OSTNP61366 133 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 GPC5P78333 572 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 PIGOQ8TEQ8 1089 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 RMDN2Q96LZ7 410 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 CPVLQ9H3G5 476 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 TBX22Q9Y458 520 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 ZNF804BA4D1E1 1349 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 MIF4GDA9UHW6 222 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 MCAMP43121 646 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 PSMC1P62191 440 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 NOA1Q8NC60 698 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 ANKRD36BP1Q96IX9 119 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 TRIM51Q9BSJ1 452 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 NUP85Q9BW27 656 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 SRGAP2BP0DMP2 458 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 PSMA2P25787 234 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 IREB2P48200 963 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 RAD9BQ6WBX8 426 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 SFR1Q86XK3 245 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 ZBED8Q8IZ13 594 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 PNMA2Q9UL42 364 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 FCER1AP12319 257 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 HOXA13P31271 388 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 EPHA10Q5JZY3 1008 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 ARHGAP18Q8N392 663 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 SLC13A1Q9BZW2 595 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 LMCD1Q9NZU5 365 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 DBR1Q9UK59 544 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
GTF3C1-202ENST00000561623 E9PMD0 336 aa10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 POLR3CQ9BUI4 534 aaPredicted RBP10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 KIF9Q9HAQ2 790 aa10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 COASYQ13057 564 aa10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 RASGRF1Q13972 1273 aa10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 GPATCH4Q5T3I0 446 aaKnown RBP10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.67
GTF3C1-202ENST00000561623 GDF11O95390 407 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ARL4AP40617 200 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PDIA2Q13087 525 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 NR1H3Q13133 447 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 CYTH1Q15438 398 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ANO5Q75V66 913 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF564Q8TBZ8 553 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 CEP170P1Q96L14 293 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 AATKQ6ZMQ8 1374 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 CLASP1Q7Z460 1538 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 NMT2O60551 498 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms