RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	DSG1	Q02413	1049 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	PLEKHN1	Q494U1	663 aa	Predicted RBP	5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	HABP4	Q5JVS0	413 aa	Known RBP	5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	RNF219	Q5W0B1	726 aa	Predicted RBP	5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	TMEM151B	Q8IW70	566 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	KIAA1958	Q8N8K9	716 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	ARRDC4	Q8NCT1	418 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	BORCS6	Q96GS4	357 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	CCDC136	Q96JN2	1154 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	SCYL1	Q96KG9	808 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	NAP1L5	Q96NT1	182 aa	Predicted RBP	5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	ORAI3	Q9BRQ5	295 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	ZNF552	Q9H707	407 aa	Predicted RBP	5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	SLC5A4	Q9NY91	659 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	KLHL14	Q9P2G3	628 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	FAN1	Q9Y2M0	1017 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	NAIP	Q13075	1403 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	IQGAP1	P46940	1657 aa		5.28	□□□□□ -1.56
LRRC28-222	ENST00000561431	HFM1	A2PYH4	1435 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	RFXAP	O00287	272 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	BUB1B	O60566	1050 aa	Predicted RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	CLASP2	O75122	1294 aa	Known RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZNF200	P98182	395 aa	Predicted RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ITK	Q08881	620 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	DDB1	Q16531	1140 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ETV3L	Q6ZN32	361 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZC3H18	Q86VM9	953 aa	Known RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	SPATS2	Q86XZ4	545 aa	Known RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	SH3RF2	Q8TEC5	729 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	CLEC4D	Q8WXI8	215 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ERCC4	Q92889	916 aa	Predicted RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	MTMR8	Q96EF0	704 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	TSPAN17	Q96FV3	270 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	TOE1	Q96GM8	510 aa	Known RBP	5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ACSS2	Q9NR19	701 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	KCNH7	Q9NS40	1196 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	SPTLC3	Q9NUV7	552 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	ARHGAP28	Q9P2N2	729 aa		5.27	□□□□□ -1.57
LRRC28-222	ENST00000561431	TMEM131L	A2VDJ0	1609 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	IQSEC2	Q5JU85	1478 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	NPHP4	O75161	1426 aa	Predicted RBP	5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431		A0A0U1RQG5	324 aa	Predicted RBP	5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	GPR39	O43194	453 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	SASH1	O94885	1247 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	BPI	P17213	487 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	VIPR1	P32241	457 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	STAT5A	P42229	794 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	NKX3-2	P78367	333 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	PAN2	Q504Q3	1202 aa	Known RBP	5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	CD300LD	Q6UXZ3	194 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	OTOP1	Q7RTM1	612 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	EFHB	Q8N7U6	833 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	HIPK4	Q8NE63	616 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	WDR48	Q8TAF3	677 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	FBXO41	Q8TF61	875 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	EMC7	Q9NPA0	242 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	DDX56	Q9NY93	547 aa	Known RBP	5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	NOC2L	Q9Y3T9	749 aa	Known RBP	5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	STRCP1	A6NGW2	1772 aa		5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	SCAF11	Q99590	1463 aa	Known RBP	5.26	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZFYVE9	O95405	1425 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	FAM90A27P	A6NNH2	459 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	FOXP2	O15409	715 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	TPD52L2	O43399	206 aa	Known RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	ULK1	O75385	1050 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	KATNA1	O75449	491 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	EYA4	O95677	639 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	CYP17A1	P05093	508 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	PFKL	P17858	780 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	POU3F3	P20264	500 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	PML	P29590	882 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	EPHA5	P54756	1037 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	YBX1	P67809	324 aa	Known RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	TARBP2	Q15633	366 aa	Known RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	LHFPL2	Q6ZUX7	228 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	NOSTRIN	Q8IVI9	506 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	FAM126B	Q8IXS8	530 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	FEZF2	Q8TBJ5	459 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	SLC5A5	Q92911	643 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	ELF4	Q99607	663 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	NGRN	Q9NPE2	291 aa	Known RBP	5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	DTL	Q9NZJ0	730 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	SPO11	Q9Y5K1	396 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	B3GALT1	Q9Y5Z6	326 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	TMEM2	Q9UHN6	1383 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	SPHKAP	Q2M3C7	1700 aa		5.25	□□□□□ -1.57
LRRC28-222	ENST00000561431	CPS1	P31327	1500 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	CLTCL1	P53675	1640 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	ALK	Q9UM73	1620 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	S100B	P04271	92 aa	Predicted RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZBTB48	P10074	688 aa	Predicted RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	NCAM1	P13591	858 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	FAH	P16930	419 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	PI3	P19957	117 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	LSP1	P33241	339 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZEB1	P37275	1124 aa	Predicted RBP	5.24	□□□□□ -1.57

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