RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 DIS3LQ8TF46 1054 aaKnown RBP12.92□□□□□ -0.34
HERC1-214ENST00000561400 TRAPPC12Q8WVT3 735 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
HERC1-214ENST00000561400 STAMQ92783 540 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 CCDC97Q96F63 343 aaPredicted RBP12.92□□□□□ -0.34
HERC1-214ENST00000561400 GLT1D1Q96MS3 346 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 MTRQ99707 1265 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 DACT1Q9NYF0 836 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 HDAC6Q9UBN7 1215 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
HERC1-214ENST00000561400 DBR1Q9UK59 544 aaKnown RBP12.92□□□□□ -0.34
HERC1-214ENST00000561400 GOLGA6CA6NDK9 693 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 GOLGA6BA6NDN3 693 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 GOLGA6DP0CG33 693 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 SLC12A3P55017 1021 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 MTERF2Q49AM1 385 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 OTUD6AQ7L8S5 288 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 GAS2L3Q86XJ1 694 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 VTI1AQ96AJ9 217 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 ZBTB10Q96DT7 871 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 CEP170P1Q96L14 293 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 GOLGA6AQ9NYA3 693 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 MYH11P35749 1972 aa12.91□□□□□ -0.34
HERC1-214ENST00000561400 ANKRD33BA6NCL7 494 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 SSBP05455 408 aaKnown RBP eCLIP12.9□□□□□ -0.34
HERC1-214ENST00000561400 IGBP1P78318 339 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 ITGA7Q13683 1181 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 MAP9Q49MG5 647 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 SYT2Q8N9I0 419 aaPredicted RBP12.9□□□□□ -0.34
HERC1-214ENST00000561400 ANKRD7Q92527 254 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 STARD7Q9NQZ5 370 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 TPM3P06753 285 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 EN2P19622 333 aaPredicted RBP12.9□□□□□ -0.34
HERC1-214ENST00000561400 ADAM17P78536 824 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 PPFIA1Q13136 1202 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 GRIK4Q16099 956 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 ARSHQ5FYA8 562 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 MARCH8Q5T0T0 291 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 LMBR1Q8WVP7 490 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
HERC1-214ENST00000561400 SENP6Q9GZR1 1112 aaPredicted RBP12.9□□□□□ -0.34
HERC1-214ENST00000561400 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
HERC1-214ENST00000561400 ARHGEF35A5YM69 484 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 H0YHG0 523 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 COL6A1P12109 1028 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 HOXC8P31273 242 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 SARNPP82979 210 aaKnown RBP12.89□□□□□ -0.35
HERC1-214ENST00000561400 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
HERC1-214ENST00000561400 ZNF484Q5JVG2 852 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 RINT1Q6NUQ1 792 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 ABHD8Q96I13 439 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 RUSC1Q9BVN2 902 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
HERC1-214ENST00000561400 GTF2IRD1Q9UHL9 959 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 CYP11B2P19099 503 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 CASP1P29466 404 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 AFMP43652 599 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 SV2BQ7L1I2 683 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 SLC43A3Q8NBI5 491 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 PAWRQ96IZ0 340 aaKnown RBP12.89□□□□□ -0.35
HERC1-214ENST00000561400 CCDC43Q96MW1 224 aaKnown RBP12.89□□□□□ -0.35
HERC1-214ENST00000561400 DHX33Q9H6R0 707 aaKnown RBP12.89□□□□□ -0.35
HERC1-214ENST00000561400 POLD4Q9HCU8 107 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 PDLIM7Q9NR12 457 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 COL1A2P08123 1366 aa12.89□□□□□ -0.35
HERC1-214ENST00000561400 MYMKA6NI61 221 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
HERC1-214ENST00000561400 KINO60870 393 aaKnown RBP12.88□□□□□ -0.35
HERC1-214ENST00000561400 C22orf31O95567 290 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 KLRC1P26715 233 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 HNRNPH2P55795 449 aaKnown RBP12.88□□□□□ -0.35
HERC1-214ENST00000561400 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 GDF6Q6KF10 455 aaPredicted RBP12.88□□□□□ -0.35
HERC1-214ENST00000561400 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 SESTD1Q86VW0 696 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 TSC1Q92574 1164 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms