RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 HSD17B14Q9BPX1 270 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 JPH2Q9BR39 696 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 FDXACB1Q9BRP7 624 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 KIAA1024Q9UPX6 916 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 MYO9BQ13459 2157 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 SIP14410 1827 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 ARHGEF35A5YM69 484 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 RFXAPO00287 272 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 ENPP3O14638 875 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 GPR182O15218 404 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 STX6O43752 255 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 GPR32O75388 356 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 CSPG5O95196 566 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 GJB5O95377 273 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 FOSL2P15408 326 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 ZSCAN20P17040 1043 aaPredicted RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 LIG1P18858 919 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 GPC3P51654 580 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 PAN2Q504Q3 1202 aaKnown RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 ODR4Q5SWX8 454 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 BRAPQ7Z569 592 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 C4orf32Q8N8J7 132 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 CDX2Q99626 313 aaPredicted RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 RAD9AQ99638 391 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 ADAM2Q99965 735 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 POLD4Q9HCU8 107 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 TUFT1Q9NNX1 390 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 DDX19AQ9NUU7 478 aaKnown RBP11.28□□□□□ -0.6
HERC1-212ENST00000561348 LAMA3Q16787 3333 aa11.28□□□□□ -0.6
HERC1-212ENST00000561348 MICAL3Q7RTP6 2002 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 LAD1O00515 517 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 SPATA31C1P0DKV0 1188 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.61
HERC1-212ENST00000561348 RFC5P40937 340 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.612e-6■■■■□ 23.5
HERC1-212ENST00000561348 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.61
HERC1-212ENST00000561348 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 LONRF3Q496Y0 759 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
HERC1-212ENST00000561348 FAM102BQ5T8I3 360 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 GPR153Q6NV75 609 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 CATSPER4Q7RTX7 472 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 SPRED2Q7Z698 418 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 FAM228AQ86W67 206 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 EXOC8Q8IYI6 725 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.61
HERC1-212ENST00000561348 FTHL17Q9BXU8 183 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 ANKEF1Q9NU02 776 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 PCDHB7Q9Y5E2 793 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 COL4A3BPQ9Y5P4 624 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 CLIC4Q9Y696 253 aa11.27□□□□□ -0.61
HERC1-212ENST00000561348 LAMA2P24043 3122 aaKnown RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 E9PMD0 336 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 DGAT1O75907 488 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 ARHGEF15O94989 841 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 RPA1P27694 616 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 RARRES1P49788 294 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 GATMP50440 423 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 TAP1Q03518 808 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 LAMTOR4Q0VGL1 99 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 BTG3Q14201 252 aaPredicted RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 CCDC85BQ15834 202 aaPredicted RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 IL17AQ16552 155 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 ECM1Q16610 540 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 RTN4RL1Q86UN2 441 aaPredicted RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 TOP1MTQ969P6 601 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 POLR3FQ9H1D9 316 aaPredicted RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 BHMT2Q9H2M3 363 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 ADAMTS10Q9H324 1103 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 TMX1Q9H3N1 280 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 DHX33Q9H6R0 707 aaKnown RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 ERVK-5Q9HDB9 667 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 GPRC5CQ9NQ84 441 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 PIN4Q9Y237 131 aaKnown RBP11.26□□□□□ -0.61
HERC1-212ENST00000561348 INSL6Q9Y581 213 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 KDM3AQ9Y4C1 1321 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 SZT2Q5T011 3432 aa11.26□□□□□ -0.61
HERC1-212ENST00000561348 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 INO80B-WBP1J3KQ70 363 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms